Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2531 |
Symbol | |
ID | 4693781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2862442 |
End bp | 2863128 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639850297 |
Product | ABC transporter related |
Protein accession | YP_997294 |
Protein GI | 121609487 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.799962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTCG AGTCTTCCAT TGCTCTGCGT GCCAGCAACT TGCACAAATT ATACGCATTT GGCGAAACCT CGGTGGCCGC ACTGCGCGGG GTGGATATCA CAATTGAACA GGGTGACTTT GCTGCCTTAT GTGGCCCCTC TGGTAGTGGC AAGAGCACTT TGCTCAATCT GCTTGGATTG TTGGAACCAC CAAATCAGGG TGAAATTTGG CTCGATGGTC AGACGGTCGA CCACGGAGCT ACTGAGGCAC TTGATCAATT GCGACGGAAT CGCCTGGGCT TTGTGTTTCA GAGCTTCAAC CTAGTTCCGG TGCTCAGTGC GATAGAAAAC GTTGAGCTTC CCTTGTTAAT GACATCCATG TCGTCGAGTG AGCGCCGCAA GCGCGCAGAG AGTTTGCTTG ATGCGGTGGG CCTAGCTGAC CGCATGAGCC ACCGGCCCAA GCAGCTTTCC GGCGGCCAAC AACAGCGGGT GGCGGTGGCA CGGGCATTGG TGAATGCGCC GCTGTTGGTG TTGGCCGATG AGCCTACTGC CAGTCTAGAT AGTCAGACCG CTGCACAACT GCTCGACCTG ATGCAGTCGC TGAATCGGCA ACTGGGAACT GCTTTTTTGT TCTCTACTCA CGATGCGCGC GTGGTAGAGC GGGCGCAGAA GTTGTTCACA CTCTCCGATG GAAGAATATT GGCATGA
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Protein sequence | MAVESSIALR ASNLHKLYAF GETSVAALRG VDITIEQGDF AALCGPSGSG KSTLLNLLGL LEPPNQGEIW LDGQTVDHGA TEALDQLRRN RLGFVFQSFN LVPVLSAIEN VELPLLMTSM SSSERRKRAE SLLDAVGLAD RMSHRPKQLS GGQQQRVAVA RALVNAPLLV LADEPTASLD SQTAAQLLDL MQSLNRQLGT AFLFSTHDAR VVERAQKLFT LSDGRILA
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