Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2508 |
Symbol | |
ID | 4693560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2840131 |
End bp | 2841018 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639850274 |
Product | LysR family transcriptional regulator |
Protein accession | YP_997271 |
Protein GI | 121609464 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000736174 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTCA AAACCCTCTA CACGCTGATT GCAGTGGCCG ATCGCGGCAG CTTTGCCGAG GCCGGCAATG CACTCGGCCT CTCATTGTCG GCCGTCAGCA TACAAATGCG GGCGCTCGAA GAAGAATTGG GAACGACCAT TTTCGACCGC AGCCGCCGTC CACCGGTACT GACCGAGTCC GGCATCACAC TGACGCAGCG CGCACGCGAA TTGATCGCCC ATTGGGAAAG CATGAGCGAG GCGCTGAAAA AAGACGCCTC GGGCGGTTTG TTGAAACTCG GCGCGGTGCA CACCTGTGTG TCAGGCATAT TGCCACTGGC ACTCAAACAG ATGCAGGAAA AAGGCCAGCG CATTGATTTT CACGTCACCA CCGGACTGAC CCATGAACTG GAGAAAGCCG TTTTTCATCG GCACCTCGAT GCCGCCATCG TGACCCGGCC CGAAGACCTG CGGGAAGACC TGGAATTCTT CCCGTTCATC GACGAAGCGC TGATGGTGAT CACGCATGAA ACGACCAGGG AAACGACCGA CAAGAAAATC CTCGAAGGCA CGCCCTATGT GCGTTTCAAT CGCGCGGCGC GGGTCGGCAG TCAGATACAG CAGGAAATCA CCCGGCGCGC CATCGTGGTT CGATCGGTGA TGGAGATCGA CACCCTCGAA GGCGTTGTCG CAATGGTGGC AAACGGCCTC GGCTCGTCCA TCGTCCCGGC GCGGCGGGTG GCCAATGATT TTCCGAAAAG CATCAAGACC GTGCCATTCG GCAAGCCGCA ATTGATTCGC CGGCTGGGAG TACTGCAGCC GCGCAACCAC CCGCGTGCCC ATCTGTCGCA AATGCTCATC GATGCATTGC GTGCAGTGGC CCAAACCGCC GCGCCATTCG AGCACTGA
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Protein sequence | MDVKTLYTLI AVADRGSFAE AGNALGLSLS AVSIQMRALE EELGTTIFDR SRRPPVLTES GITLTQRARE LIAHWESMSE ALKKDASGGL LKLGAVHTCV SGILPLALKQ MQEKGQRIDF HVTTGLTHEL EKAVFHRHLD AAIVTRPEDL REDLEFFPFI DEALMVITHE TTRETTDKKI LEGTPYVRFN RAARVGSQIQ QEITRRAIVV RSVMEIDTLE GVVAMVANGL GSSIVPARRV ANDFPKSIKT VPFGKPQLIR RLGVLQPRNH PRAHLSQMLI DALRAVAQTA APFEH
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