Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2278 |
Symbol | |
ID | 4694626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2583576 |
End bp | 2584922 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639850045 |
Product | extracellular solute-binding protein |
Protein accession | YP_997044 |
Protein GI | 121609237 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCAG AAAATCATCG GCAATGGTCT GCCACGGCCC GCACAGCGAT TGCGCTGGGT GCATGGCTGC TTGCCGCAGT GGCCGGCACC GGTGTTCAGG CGCAAGAGTT CAAAGGTTAT ACGCTGAAAG TAAAGCTGAT CGGTGGCACA CAGTATGAGC CGCTGTACGC CATCATCCCG GAATGGGAAA AGAAAACCGG TGCCAGGGTC GAAATCCTGT CACGCAAAAA CCACTTCGAA TTGGACAAGG AGATCAAGCA GGACATTGCT GCCCGCAAGA TCGACTACTG TGTGGCATCA AACCATACCA GTTTCTCACC ACAATATGGT GATATCTATC GTGATCTGCA AAAAGCATTG CCTGCCACCT GGGTGAGTCA ATTCGGGAAA CTGGTCCTTG AGCATTCCAC CGTGGCTGGT TCCCTGGTGC TGTTGCCACG CCATTCCGAT GTCAGCGAAC TGTATTACAA TAAAAAATTC TATGACAACA CCGAAAACAA GGCCGCCTAC AAAACCAGAT TTGGCAAAGA GTTACTGGTT CCCGATACCT GGACAGAATT TGCACGGCAG GCAAAGTTCT TCAGCAAGCC GCCCTCGGTC TATGGCACCC AGTTCCCCGG CAAGGATGAG GCCATTACCG GGCGTTTCTA TGAAATGCTC GTCGCAGAAG GCGGTGCGTT GTTCGACAAG GACTGGCGCC CGACATTCAA TTCTGCGGTG GGTGAGCGTG CCCTGAATTT CTTTGTCGAC CTTTACAAGT CCGGAGCCGT GCCCAAGGGT GTGCCCAACT ATATTTGGGA CGACCTGGGC CAGGGTTTTG CCAGCGGCAA TATCGCGCTG AATCTGGATT GGGGTGGTTG GGCCGGCTTT TTCAACGACC CCAAAAACTC CAGGATCGCC GGCAACGTTG GCATTGCGCG TGCACCCAGG GGTTCTTCGG GAAAACGCAC CGGTTGGGCC GGGTCACATG GTTTTTCCAT TACCAAGGCT TGTGATAATC CAAAGGCCGC AGCCAGTTTG GTCATGGCCC TGACAAGTCT GGAGGCCCAG ATGATCGAGG CGCGCAATGG CATGATGCCA ACCCGCATGG ATGCACAAAA GCAGGCCGCA GGGGAATTTG CAAAAAAGGG CGACAAGTAC ATGCTGGAAG TATTTCAGAC CTTTGCCAAA GGCATGGCCG AGGATGCATT TACACCACCG CTGATCCCGG AGTGGATCGA AGCCTCCAAC GCCATTTGGC CTGAGTTGCA AAAAGCGCTG ATCGGCGAGA AAACCGGCAA GCAGGCGCTG GATGACGCAG CCAACAAAGT ATTGGCGATC ATGCAGGATG CCGGTCGGGT GAGATAG
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Protein sequence | MKSENHRQWS ATARTAIALG AWLLAAVAGT GVQAQEFKGY TLKVKLIGGT QYEPLYAIIP EWEKKTGARV EILSRKNHFE LDKEIKQDIA ARKIDYCVAS NHTSFSPQYG DIYRDLQKAL PATWVSQFGK LVLEHSTVAG SLVLLPRHSD VSELYYNKKF YDNTENKAAY KTRFGKELLV PDTWTEFARQ AKFFSKPPSV YGTQFPGKDE AITGRFYEML VAEGGALFDK DWRPTFNSAV GERALNFFVD LYKSGAVPKG VPNYIWDDLG QGFASGNIAL NLDWGGWAGF FNDPKNSRIA GNVGIARAPR GSSGKRTGWA GSHGFSITKA CDNPKAAASL VMALTSLEAQ MIEARNGMMP TRMDAQKQAA GEFAKKGDKY MLEVFQTFAK GMAEDAFTPP LIPEWIEASN AIWPELQKAL IGEKTGKQAL DDAANKVLAI MQDAGRVR
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