Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2144 |
Symbol | |
ID | 4690561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2435857 |
End bp | 2436741 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639849906 |
Product | LysR family transcriptional regulator |
Protein accession | YP_996910 |
Protein GI | 121609103 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.527134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCAGT ACCATAAGTG GATACGGTCG TTTCACGCCG TCGCAAAAAC ACACAGTTTT ACTGCTGCGG CGTCTTATCT GCGCATCGGC CAGCCAACCA TCAGTGAACA GGTCAAGGCA TTGGAAGACC GCTTTGCGGT GGAGTTGTTG CATCGCAGCG GCCGCCATGT CGCATTGACC GATGCCGGGC GGCGCTTGTA TGAAATCACG GAAGGGATTT TTGGCCAGGA AGATGAGGCA GTGCAATTGC TGCAAAGCCT GCACTCGCAA AAAACCGGCC TGTTGCGCAT CGGCGCTGTT TCTCCGCCGG TGGTGATGAA CCTGACTTAC GACCTGATGC GCAAACATCC CGGCATCGAG TTCGCGATCT CGATCAACCC GGAAAAGGAA ACGCTTTTTC GGCTCTATGA CTTCAGGATC GACATCGCCA TTTTGGCCTA CGTCGACCCC GACAAACGCC TGCATGTCGC GCCTTATCGC ACCTATCCCA TCGTCGCCGT GGTCCGGGAC GACCATGCCT GGGCGAGCAA AGCCTCCATC CCCTTGACAC AGATCCGGCA TGAAGCGGTC ATCATGCGCG AGTCCGGCTC CAAGACCCGC GAGTTGCTGG AACATGCCTG TGGCAAGCAA GGCATACCGA TCCATTGCGT CATGGAACTC AACAGCCGGG AAGCCATCAT GCACGCCATT GCAGAGGGCC TTGGCATAGG CTTCGTATCG GCGATTGAGT ACACGGCGAT ACCGGGAACG AAAGCGATCC GGCTGCGGGA CGCGGAGGTG AAGATCAGTT ATTACATGTG CACTCTTGCG GTACGAAAGA ACCGCCCCTT GATCAAAAGT GTGCTTGAGG CGGAAAGCGA ACCCGGTCGC AAGAAAACTG TCTGA
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Protein sequence | MYQYHKWIRS FHAVAKTHSF TAAASYLRIG QPTISEQVKA LEDRFAVELL HRSGRHVALT DAGRRLYEIT EGIFGQEDEA VQLLQSLHSQ KTGLLRIGAV SPPVVMNLTY DLMRKHPGIE FAISINPEKE TLFRLYDFRI DIAILAYVDP DKRLHVAPYR TYPIVAVVRD DHAWASKASI PLTQIRHEAV IMRESGSKTR ELLEHACGKQ GIPIHCVMEL NSREAIMHAI AEGLGIGFVS AIEYTAIPGT KAIRLRDAEV KISYYMCTLA VRKNRPLIKS VLEAESEPGR KKTV
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