Gene Veis_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1934 
Symbol 
ID4691290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2169879 
End bp2170646 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content66% 
IMG OID639849701 
Productribose-5-phosphate isomerase A 
Protein accessionYP_996705 
Protein GI121608898 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCA CGCCCCCTTT GCCTCGGCAA TTGCCCCGGG GCCTGACCCA AGACGAACTC 
AAGACCCGCG TCGGCCAGGC CGCTTTGCGC TATGTGCTGC CGGGCGATAT CGTGGGGGTG
GGCACGGGCT CTACCGTGAA CAAGTTCATC GATGCTCTGG CGGGCATGAA AGAGCAGATC
AAGGGCGCCG TGTCCAGTTC GGTGGCAAGC ACCGAACGCC TGCAGGCCCT GGGCATCGCG
GTGTTCGATG CCAATGCCGT GCCGTCGCTA TCGGTCTGCA TCGACGGGGC CGACGAAATC
GATGGCCAGG GCCATATGCT CAAGGGCGGC GGCGCCGCGT TGACGCGCGA GAAGATCGTG
GCAGCGCTGG CCGAGCGCTT CGTCTGTATT GCCGACGAGT CGAAACTGGT GCGCACACTG
GGGCAATTTC CCCTGCCCGT CGAGGTGATC CCGATGGCGG CCAGGCACAT CGCCCGCCGT
TTTGCAGCCA TGGGCGGGCA GGCCAGTCTG CGGCTCAGGA ACGGGCAGGC GCTGGTGACC
GACAACGGCC AGCATATCCT CGATGTCAAG GGACTGTCGA TCACCGACCC GCTGGCGTTC
GAGTCGCAAG TCAACCAATG GCCGGGCGTG GTGACCGTGG GGGTGTTTGC GCACCAGAAG
GCATCGGTCT GCCTGTTGGG CACGGCCCAG GGGGTCAAGA CCCTGGTTTA CCCGGGGCCG
GACAGGCCGG AGCCGGCGAC CCGCCGATGC TCCGCATCAA ACCATTAG
 
Protein sequence
MTTTPPLPRQ LPRGLTQDEL KTRVGQAALR YVLPGDIVGV GTGSTVNKFI DALAGMKEQI 
KGAVSSSVAS TERLQALGIA VFDANAVPSL SVCIDGADEI DGQGHMLKGG GAALTREKIV
AALAERFVCI ADESKLVRTL GQFPLPVEVI PMAARHIARR FAAMGGQASL RLRNGQALVT
DNGQHILDVK GLSITDPLAF ESQVNQWPGV VTVGVFAHQK ASVCLLGTAQ GVKTLVYPGP
DRPEPATRRC SASNH