| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1885 |
|---|
| Symbol | |
|---|
| ID | 4690690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2109171 |
|---|
| End bp | 2110142 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639849652 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_996656 |
|---|
| Protein GI | 121608849 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.369065 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGCC GCACCACCTT GCTCATCGCC TGCGCGCTGG CCCTGCCCCT GCTGCCCGCG
CAGGCGGACA GCCTGGCCGA CAGGCCGATC ACGCTGGTCG TGCCCTTCCC GCCGGGCGGC
CCGACCGACG CGATGGCGCG CACGCTGGCC GCCTCGATGA AAGACCTGCT CGGCCAGACC
ATGGTGGTGG AAAACCGCGC CGGCGCCGGC GGCAACATCG GGGCCGAGTA CGTGGCGCGC
GCTGCGGCCG ACGGCCAGAC GCTGCTGTTT GGCACCTCGG GCCCGCTGGC CATCAACGCC
AGCCTGTACC GCAAGATCGG CTACGACCCG GTCAAGAGCT TTGCGCCCGT GATACAGGTC
GGGCACCTGC CCAATATCCT GGTGGTGCAT CCGGCGGTGC CGGTGCACAA CGTCAAGGAA
CTGCTGGCCT ACGCGAAGGC CCACCCGGGC CGGCTCAGCT ATGCCTCCTC GGGCAATGGC
GCCTCCTCGC ACCTGGCCGG CGTGCTGTTC AACGCCAGCG CCGGCGTTCA GTTGCAGCAC
ATCCCGTACA AGGGCACGGG GCCGGCGCTC AACGACCTGC TCGGCGGCCA GGTCAGCATG
AGCTTTACCG ACGTGCTGAC CGCCGCGCCC TACGTCAAGG CCGGCAGGTT GCGCGCGCTG
GGCATTGCCA CCGCGGCACG CTCGCAGGTG CTGCCCGATC TGCCCAGCAT TGCCGAGCAG
GGCCTGGCCG GCTACGACGT GAGCGTCTTC TTTGGCATCG TCGCGCCCGC CCAGACACCG
CCAGAGCGCG TGCGCCAACT CAACCGCGCT TTCGCCCAGG TGCTGGCCGC GCCCGAGGTG
CGGCAGAAAT TCGCCGCCCA GGGGCTGGAG CCGGCGCCGG CCTCGACGCC CGAGCAACTG
GGCCAATTCA TCCCCGCGCA AATGGCGCTG TGGTCCGCCG TGGTGCGGCA ATCGGGCGCG
CAGCTCGATT GA
|
|---|
| Protein sequence | MQRRTTLLIA CALALPLLPA QADSLADRPI TLVVPFPPGG PTDAMARTLA ASMKDLLGQT
MVVENRAGAG GNIGAEYVAR AAADGQTLLF GTSGPLAINA SLYRKIGYDP VKSFAPVIQV
GHLPNILVVH PAVPVHNVKE LLAYAKAHPG RLSYASSGNG ASSHLAGVLF NASAGVQLQH
IPYKGTGPAL NDLLGGQVSM SFTDVLTAAP YVKAGRLRAL GIATAARSQV LPDLPSIAEQ
GLAGYDVSVF FGIVAPAQTP PERVRQLNRA FAQVLAAPEV RQKFAAQGLE PAPASTPEQL
GQFIPAQMAL WSAVVRQSGA QLD
|
|---|
| |