Gene Veis_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1799 
Symbol 
ID4691359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2009334 
End bp2010977 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content64% 
IMG OID639849565 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_996571 
Protein GI121608764 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGCC TGATACAAGA TCAACCATTG CTGATCTCAT CGATGATCGA GTTTGCCGAA 
CGCCACCATG GCGACACCGA GATCGTTTCC CGTCGGGTCG AGGGGGACAT CCATCGCTAC
AACTACCGCG AGCTTGGCCT GCGTGCCCGG CGCCTGGCCA ATGCGCTCGA CAAGCTCGGG
CTGCTGTTCA GCGACAGGGT CGCCACCCTG GCCTGGAACG GCTACCGCCA CATGGAGATG
TACTTCGGCG TCAGTGGCTC GGGCCGCGTT CTGCACACCA TCAACCCGCG CCTGCATCCC
GAGCAGATCG CCTGGATCAT GAACCATGCC GAAGACCAGT TGCTGTGCTT TGACCTGAGC
TTTTTGCCCC TGGTGCAGGC CGTGCATGCC AAATGCCCTG GCGTCAAGCA TTGGGTGGCC
TTGTGCAACG CAGACCGGCT GCCGGCAGAC TCCGGCATCC CTGGCCTTTT GAGCTATGAG
GACTGGATCG GCGCGCAGTC GCCGGACTAT GCATGGCCCC GGTTCGACGA GAACTCGGCC
TCCAGCATGT GCTACACCAG CGGCACCACG GGCAACCCCA AGGCCGCCCT CTACAGCCAC
CGCTCGACCA CGCTGCATGC CTACGCAGCG GCCTTGCCCG ACGTGATGTG CTTGTCGGCG
CGCGACTCGG TGCTGCCCGT GGTGCCGATG TTCCATGTCA ATGCCTGGGG CATTCCGTAC
TCGGCGGCGC TGATGGGCTG CAAGCTGGTG TTTCCCGGGC CGGCGATGGA TGGCAAGTCG
ATCTACGAAC TGATCGAGGC CGAACAGGTC AACTACGCCG CCGGCGTGCC CACCGTCTGG
CAGATGATGC TCGGCCACAT GAAGCCTGCG GGGCTCCGGT TCTCGACATT GCGGCGCACC
GTGATTGGCG GCTCGGCATG CCCGCCGGCG ATGATCCACA CCTTCAAGGA AGACTATGGC
GTCGAGGTGC TGCACGCCTG GGGCATGACC GAGATGAGCC CGCTGGGCAC GCTGTGCACC
CTGAAGAGCA AGCACCTTGC GTACCCCAAA GACGAGCAGA TGAAGCTCCT GCAAAAACAG
GGCCGCGCGA TCTACGGCGT CGACCTGAAG ATCGTGGACG GCGATGGCAA GGAACTGCCC
TGGGATGGCA AGACCTACGG GGACCTGCTG GTCCGTGGCC CATGGATCGT GAACGGCTAC
TTCAAGGGCG AGGGGGGCGA CCCGCTCATC GAGGACGAAC AAGGCCGGCG CTGGTTCCCG
ACCGGGGATG TGGCCACCAT AGACGCCGAC GGCTTCATGC AGATCACCGA CCGCAGCAAG
GACGTGATCA AGTCCGGGGG CGAGTGGATC AGCTCGATCG CGATCGAAAA CCTGGCCATG
GCGCACCCCG CCGTCGCCAT GGCCGCCTGC GTGGGCATGC CGCACCCCAA GTGGGACGAG
CGCCCCATCG TGGCCGTGGT CAAACGCCCC GGCGCGCAGC TCACGCGCGA GGAGATGCTG
GCGTTCTACG AGGGCAAGGT CGCCAAGTGG CAAATCCCCG ATGACGTGGT GTTCGTCGAA
GCCATCCCGC TGGGCGCCAC CGGCAAGATG CTCAAGACCA AACTGCGCGA GCAGCTCAAA
GGCTACCAAC TGCCGAGCCT GTAA
 
Protein sequence
MLGLIQDQPL LISSMIEFAE RHHGDTEIVS RRVEGDIHRY NYRELGLRAR RLANALDKLG 
LLFSDRVATL AWNGYRHMEM YFGVSGSGRV LHTINPRLHP EQIAWIMNHA EDQLLCFDLS
FLPLVQAVHA KCPGVKHWVA LCNADRLPAD SGIPGLLSYE DWIGAQSPDY AWPRFDENSA
SSMCYTSGTT GNPKAALYSH RSTTLHAYAA ALPDVMCLSA RDSVLPVVPM FHVNAWGIPY
SAALMGCKLV FPGPAMDGKS IYELIEAEQV NYAAGVPTVW QMMLGHMKPA GLRFSTLRRT
VIGGSACPPA MIHTFKEDYG VEVLHAWGMT EMSPLGTLCT LKSKHLAYPK DEQMKLLQKQ
GRAIYGVDLK IVDGDGKELP WDGKTYGDLL VRGPWIVNGY FKGEGGDPLI EDEQGRRWFP
TGDVATIDAD GFMQITDRSK DVIKSGGEWI SSIAIENLAM AHPAVAMAAC VGMPHPKWDE
RPIVAVVKRP GAQLTREEML AFYEGKVAKW QIPDDVVFVE AIPLGATGKM LKTKLREQLK
GYQLPSL