| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1645 |
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| Symbol | |
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| ID | 4695053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 1828835 |
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| End bp | 1830583 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639849408 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_996420 |
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| Protein GI | 121608613 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.417297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTAC CCGCAGTGCC ATCCGAACTC CGACAGGCTC TGGCAAAGCT CACTCCTTTT
TTCTGGCGGG CCTTCGTATT TGCCACCATT GGCGGCCTCC TGGTTCTGGG GCCGACGGTC
TATATGTTCG AGGTCTACGA CCGTGTGGTG AACAGCCGCA ACGAGCTGAC CCTGGCCATG
CTGACCCTGA TCGTGCTGCT GGCCATCGTC GTGATGGAGC TGCTGGAATG GGCGCGGGCC
GAAACCCTGC GGGAAGCCGG CGCCGCGCTG GACCAGGCGC TGGCCCCCCG GATTTTCAAC
GCCATCCATG TGGCCCACCT GAAGCAGGGC GCCGCCCTGG GGGTGCAGCC GATGGTCGAT
CTGCGGGTCG TGCGCGACTT CTTCCATGGC CCGGCGCTCG GGGCGGCGAT GGAAACGCCA
GTGGCGCTGA TTTTGCTGAT CCTGCTGTTC GTGATCCATC CGCTGCTGGG CTGGGTGGCG
CTGGCCGGGG CGGTGTTGCA AACCGGCGTT TCGTGGTTGA ACGAGCGCAG CACCAGCCCC
GTGATGCTGG AGGCCAACCG GTCCGACATG GGCGCGAGGA CCTACGTGGA CGGCACCTTG
CGCCACAGTG ATGTGGTTGC GGCCCTGGGC ATGGAACAAG ACATGCGCCG GCGCTGGCTC
AGGCTGTACG ACGAGGGCCT GGGGCTACAG TCCCGGGCCT CGGACAGGGC GGCGGTCTTT
CAGTCCATTG GCAAGTTTTT CCAGACCACG CTGGCTTCGG CGCTGCTGGG CCTGGGCGCC
TGGCTGCTGC TGCGCAACCA GTTGCCCGGC GGGCCGGGCA TGATGATCGT GGGGTCGGTG
CTGGGCGGGC GTGTGCTCGC GCCCTTGGTG CAAGTGGTCT CGCAATGGCG CGCCGTGATT
CAGTTGCGCG GGGCCTGGGA GCGGCTCGAG CAGATTCTGG AACGCCAGCC GGCGCCCACG
CCCAACATGC CCTTGCCCCG GCCGCAGGCG CGGGTGGCGG TGGAAAATCT GGTCGCCGGA
GCCAGCGCCG GCGCAGCGCC GTTCATCAAG GGCCTGTCGT TCCGGCTCAC CCCGGGCGAG
GTGCTCGGGG TGCTGGGCTC ATCGGCCTGC GGCAAGACCA CGCTGGCGCG CATCCTGATG
GGGCTGTGGC CGCCGCTGGG CGGCAGCGTG CGGCTCGATG GCGTCGATGT CAGCATCTGG
GACAAGGCCG AGCTAGGCCC CCATGTGGGC TATGTGCCGC AGGAGGTCGA TCTGATCGAT
GGCACGCTGG GCGAGAACAT CGTCCGTTTT GGCGAGATCG ACGGGCAGGC GATGTACGAC
GCGGCCCAGG TCGTGGGCCT GCACGCATGG ATCACCTCGC TGCCCCTGGG CTACGACACC
CCGGTGGGCG AAGCCGGGGT GATGCTCTCC GGCGGTCAAC GCCAGCGCGT GGCCCTGGCA
CGGGCCTTTT ACGGCTCGCC GGTGTTCGTG GTGCTCGATG AGCCCAATGC CAGCCTGGAT
GAAGCCGGCA ACCTCGCCCT GGCCGAGGCC CTGCGCACCT TCAAGGCGCG CGGCACCACC
ATCGTGGTGA TGACCCATCT GCAGAGCGTG CTGGCCGTGA CGGACAAACT GCTGGTGCTG
CACGCGGGCA TGCAGCAGGC TTTCGGGCCG CGCGATGAAG TGCTGGCCAT GCTTCAGGGC
CGTTCTGCGG CGGTGGCATC TGCGGCCTCC ACGGGTTCCG TAGTGACCGT CGAGGCACAG
GCTTCCTGA
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| Protein sequence | MPVPAVPSEL RQALAKLTPF FWRAFVFATI GGLLVLGPTV YMFEVYDRVV NSRNELTLAM
LTLIVLLAIV VMELLEWARA ETLREAGAAL DQALAPRIFN AIHVAHLKQG AALGVQPMVD
LRVVRDFFHG PALGAAMETP VALILLILLF VIHPLLGWVA LAGAVLQTGV SWLNERSTSP
VMLEANRSDM GARTYVDGTL RHSDVVAALG MEQDMRRRWL RLYDEGLGLQ SRASDRAAVF
QSIGKFFQTT LASALLGLGA WLLLRNQLPG GPGMMIVGSV LGGRVLAPLV QVVSQWRAVI
QLRGAWERLE QILERQPAPT PNMPLPRPQA RVAVENLVAG ASAGAAPFIK GLSFRLTPGE
VLGVLGSSAC GKTTLARILM GLWPPLGGSV RLDGVDVSIW DKAELGPHVG YVPQEVDLID
GTLGENIVRF GEIDGQAMYD AAQVVGLHAW ITSLPLGYDT PVGEAGVMLS GGQRQRVALA
RAFYGSPVFV VLDEPNASLD EAGNLALAEA LRTFKARGTT IVVMTHLQSV LAVTDKLLVL
HAGMQQAFGP RDEVLAMLQG RSAAVASAAS TGSVVTVEAQ AS
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