| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1644 |
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| Symbol | |
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| ID | 4692272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 1827065 |
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| End bp | 1828834 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639849407 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_996419 |
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| Protein GI | 121608612 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.57007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.467937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAC CTCTCCTGCG AACCGACCCC ATGTCCACCA GTGGCTCCCC CGCGCGCAGC
GAAATCGCCC AAGCCATCAC CAGCCTGCGC CATGCCTGGA TCACGCTGGT CATCTTCAGC
ATGGTCGCCA ATGTGATGAT GCTGGCGCCC ACGCTGTACA TGCTGCAGAT TTATGACCGG
GTGCTGGCCA GCCAAAACAT GCTGACTTTG CTGGTGGTAT CGCTGATCAC GCTGTTTTTC
TTTGCCGTGA TGGCATTCGC CGAATGGGCG CGCTCCTGGT TGCTGGTGCG CACCGGCGTG
CGGCTGGACC GAATGCTGCG GCAGCGGGTG TTTACGGCCA GTTTCGTGCG CGGGGTCGCC
GGCGCCAGCG CCCAGCGCGC GCAGCCGTTT GCCGACCTGA CGGAGTTGCG CACGTTCCTG
ACGGGGCCGA GCATCTTTGC CTTCTTCGAT CTGCCATGGG CCCCGGTCTA CATCGCGGCG
CTGTTCATGC TGCACCCCTT GCTCGGTGGT GTGGCGCTGG GCTTTGCGCT GATTCAGGCG
GCGCTGGCCT GGTTCGGCCA CCACCGCACG GTCGCTCCGC TGGAGGCGCT CGCCGCAACC
CAGACCAAGG AATATGCCTA CCTGCATGGC AAGCTGCGCA ATGCGGAGGC CATCGAAGCC
ATGGGAATGC TGCAGTACCT GCGCCACCGC TGGCAGTCAT TGCATGCCCG CCATGTCGGG
CAGCACGCGG TGACGCAGGG GATGACGCAC CGCGTCATGG CCTGGAGCAA ATCGGTGCGC
TATGCGCAGC AGTCGCTGGC ACTGGCGATC GGAGCCTTGC TGGTGATCGA TGGCCAGTTG
ACGGTGGGCG CGATGATCGC GACCAATGTG CTGATGGCCC GGGCACTGGC GCCGATCGAC
CAGTTGGTCG GCACCTGGCG CGGCTTTGTC GGGGCCCGCG CCGCGTATCG TCGGCTCCGG
CAATTGCTGG CCGAGCATCC GCCCTTGCCG GCCGCGTCCA AACCGGCGCG TCTGCAAGGA
AATGTGCAAC TGCGTGGTCT GCAGGCCACC GCGCCGGGCC GGACGGTGCC GATTCTCCAG
CACATCGACA TGCGCGCCAG CCCGGGCACA TTGACGGTGG TATTGGGCCC TTCCGGTTCG
GGCAAATCGA CGCTGGCGCG GGTGCTGGTC GCCGCCTGGC CGACTTGCGG CGGGGAGTTG
CTGCTCGATG GCCGGCCGAT CACGGACTGG AACCAGCAGA CCCTGGGCCC GCAGGTGGGT
TATCTGCCGC AGGACACGGC CCTGTTCGGC GGCTCCATCG CCGAGAACAT CGCCCGCTTT
GCCCAGGTCG ACCCCGCGAA AGTCATCGCC GCCGCCCGGC ACGCCGGCCT GCATGAGTTG
GTGCTGGGCT TTCCCAAAGG CTATGACACC TTGATCGGCG AGGGGGGGCG CTTGCTCTCG
GGCGGCCAGC GCCAGCGCAT CGGGCTGGCG CGTGCGCTGT ACGGCGACCC GGCGTTGCTG
GTGTTCGATG AGCCCAATGC GCACCTGGAC GAAATCGGCG AAGCCGCGCT GCTGACAGCC
ATCAGCGGGC TCAAGGCGCG CGGCAAAACC ATCCTGATGG TGACCCACCG GGCCGGGGTG
CTGGCGCAGG CCGACCAGGT ACTGGTCATG CGCGCCGGCC GCATCCATTT CCAGGGGCCG
CGTGATCAGG TTTTTGCACA GATGAACGCC GAGCGCGAGG ACGACCCGCC GCCGGCTGCG
AACGGCCTGC CCGCTCTGCT GCCAGCCTGA
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| Protein sequence | MNQPLLRTDP MSTSGSPARS EIAQAITSLR HAWITLVIFS MVANVMMLAP TLYMLQIYDR
VLASQNMLTL LVVSLITLFF FAVMAFAEWA RSWLLVRTGV RLDRMLRQRV FTASFVRGVA
GASAQRAQPF ADLTELRTFL TGPSIFAFFD LPWAPVYIAA LFMLHPLLGG VALGFALIQA
ALAWFGHHRT VAPLEALAAT QTKEYAYLHG KLRNAEAIEA MGMLQYLRHR WQSLHARHVG
QHAVTQGMTH RVMAWSKSVR YAQQSLALAI GALLVIDGQL TVGAMIATNV LMARALAPID
QLVGTWRGFV GARAAYRRLR QLLAEHPPLP AASKPARLQG NVQLRGLQAT APGRTVPILQ
HIDMRASPGT LTVVLGPSGS GKSTLARVLV AAWPTCGGEL LLDGRPITDW NQQTLGPQVG
YLPQDTALFG GSIAENIARF AQVDPAKVIA AARHAGLHEL VLGFPKGYDT LIGEGGRLLS
GGQRQRIGLA RALYGDPALL VFDEPNAHLD EIGEAALLTA ISGLKARGKT ILMVTHRAGV
LAQADQVLVM RAGRIHFQGP RDQVFAQMNA EREDDPPPAA NGLPALLPA
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