Gene Veis_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1563 
Symbol 
ID4693542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1748507 
End bp1749589 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content67% 
IMG OID639849327 
ProductNAD/NADP octopine/nopaline dehydrogenase 
Protein accessionYP_996340 
Protein GI121608533 
COG category[C] Energy production and conversion 
COG ID[COG0240] Glycerol-3-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.58964e-05 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCGAATCA CCGTTATCGG CGCCGGCAAT ATCGGCCTTG CCGTCGCCGC CCATGCCTGC 
CATCACGGCC ACGACACGAC GCTGTGGTCG CCCTCCGGGG CCGGCACGGC CGCGCTGGCC
GCCGGTCAAC CATTGCGCTA TGCGGGCGCC ATCGAAGGCC AGGCCAGGCC AGGGGTCGCC
AGTGACCTGC CCGCTGCGGT CCGGGATGCG GATGTGGTCT ACATTGCGCT GCCGGCCACG
GCCCACGCCG GCGTTTTCAA GCAACTCGGG CAATGCCTGC GCGATGCCCA GCCCGTGATC
CTCAGCGCGT TGAGTTCGGT CAGCGCGCTG GTGCTCGACC GCGAACTGGC TGCGCGTGGC
CTGCGCAGCA ACATCGCCGT GTTTGGCAGC ACGCCGATGA CGGCGCGCCG GGCACCGACC
CCCGAAGTGC AGGTCTCGGC GCTGCGCACG GTGCTGGACA TGGCCGCGCT GCCTGTGGCA
CGCGGCCCTG CCGCACTGGC TTTGTGCACG GCGCTGTTTG GCGAACGCTT CCGAATCAAC
GGTGACATCC TGGCCATGTC GCTGGCCAAC GTGAACCCGA TCGCGCACAG CGCGCTGGCC
TTGTGCAACA TCACGCGCAT GGAGCACGCC GAGCAGTGGC CGCAGTACCA CTGCATTACG
CCCTATGTCT CGCGCCTGAT CGAAACCATG GATGCCGAGC GCCTGACACT GGCGGCTGCG
GTGGGCTGCA CCCTGGGGAC GATCCACGCG CATTTTCACA ACTCGCTCGG CGTTGCGCAG
ACGGATCTGG CGACGATCGC TGCAGAAATC CATCGCCGCC GTGGCGGCCT CCCGTTAGGC
CCGACCCACC CGCTGCACCG TTACGTGCTC GAAGACATAC CCTTTGGCCT GGTGTTTTTC
GCTGCGCTGG CCAAAATGGT GAACCGCCCC GTTCCGGTGA TCAGTTCCGT CATCACCATC
ATCGACGCCC TCTACGGGCG CTCGTTCGCG CAGGAAAACG ATGTGCTTGC GACCCTGGGG
CTGGAAAAAC TGCCCTTGCC GGAATTGCTC GCGCTGGCAC GCGAAGGCTA TCCACGCCGC
TGA
 
Protein sequence
MRITVIGAGN IGLAVAAHAC HHGHDTTLWS PSGAGTAALA AGQPLRYAGA IEGQARPGVA 
SDLPAAVRDA DVVYIALPAT AHAGVFKQLG QCLRDAQPVI LSALSSVSAL VLDRELAARG
LRSNIAVFGS TPMTARRAPT PEVQVSALRT VLDMAALPVA RGPAALALCT ALFGERFRIN
GDILAMSLAN VNPIAHSALA LCNITRMEHA EQWPQYHCIT PYVSRLIETM DAERLTLAAA
VGCTLGTIHA HFHNSLGVAQ TDLATIAAEI HRRRGGLPLG PTHPLHRYVL EDIPFGLVFF
AALAKMVNRP VPVISSVITI IDALYGRSFA QENDVLATLG LEKLPLPELL ALAREGYPRR