| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1554 |
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| Symbol | prfA |
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| ID | 4690806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 1741520 |
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| End bp | 1742599 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639849318 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_996331 |
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| Protein GI | 121608524 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.438091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00494588 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACCCT TTCTCAGAAG CCAGTTGGCG CGCCATGCCC AGCGCCTGGG CGAACTCGAC
TTCCTGCTCG CGCGCCCGGA CATCATGGCG GACATGGTGC AGTACCGCAG CATCGCGCGC
GAGCATGCCG AGGTGACGCA GGTGGCGGGC CGCTACGCGC GCTACCTGCA ACGCGAGGCC
GACCTGGGCG CGGCCCGTGA ACTGCTGGCA GACCCCGGCA TGGCCGAACT GGCACAGGAA
GAAATCGACA GCAGCCAGAC CGAACTGCGG CAACTCGAAG ACGAACTGCA ACGCCTGCTG
CTGCCCAAAG AACCCGACGA TGCGCGCAAC GCCTTTGTCG AAATCCGCGC CGGCACCGGC
GGCGATGAAT CGGCGCTGTT TGCCGGCGAC CTCACGCGCA TGTACACCCG CTACGCCGCC
CGCAGAGGCT GGCAGGTCCA GGTGCTCAGC GAGAACCCGG CCGAGCTTGG CGGCTATAAG
GAAATCGTGC TGCGCATCGA CGGCGAGCAG GTCTACGGCA CGCTCAAATT CGAGTCCGGC
GGCCACCGCG TGCAGCGCGT GCCGGCCACC GAGACACAGG GCCGCGTCCA CACCAGCGCC
TGCACCGTGG CCGTGATGCC CGAGCCCGAC CCCGCCCGGG CCATCGCGCT CAACCCGGCC
GAACTGCGCA TAGACACCTT CCGCGCCAGC GGTGCCGGAG GCCAGCATAT CAACAAGACC
GACTCGGCCG TGCGCGTGGT GCACCTGCCC ACCGGCATCG TCGCCGAATG CCAGGACGGC
CGCAGCCAGC ACGGCAACAA GGCCCGGGCC TTGCAGGTGC TGCAAGCGCG CCTGCAGGAA
AAGGAACGCA GCGAACGCGC CGCCAAGGAG GCCGCGCTGC GCAAGGGCCT GATCGGCAGC
GGCGAGCGCA GCGACCGCAT CCGCACCTAC AACTTCCCGC AAGGACGGCT CACCGACCAC
CGCATCCAGT TGACGCTGTA CCAGTTGCAG CAGTTGCTCG ACGGCGAACT CGACCCAATG
CTGCAGGCCC TGGGCCATGC GCGCGAGGCC GAGCAATTGC AGGAACTGGA GCGGGGGTAA
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| Protein sequence | MKPFLRSQLA RHAQRLGELD FLLARPDIMA DMVQYRSIAR EHAEVTQVAG RYARYLQREA
DLGAARELLA DPGMAELAQE EIDSSQTELR QLEDELQRLL LPKEPDDARN AFVEIRAGTG
GDESALFAGD LTRMYTRYAA RRGWQVQVLS ENPAELGGYK EIVLRIDGEQ VYGTLKFESG
GHRVQRVPAT ETQGRVHTSA CTVAVMPEPD PARAIALNPA ELRIDTFRAS GAGGQHINKT
DSAVRVVHLP TGIVAECQDG RSQHGNKARA LQVLQARLQE KERSERAAKE AALRKGLIGS
GERSDRIRTY NFPQGRLTDH RIQLTLYQLQ QLLDGELDPM LQALGHAREA EQLQELERG
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