| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1540 |
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| Symbol | |
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| ID | 4692284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 1726251 |
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| End bp | 1727249 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639849304 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_996317 |
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| Protein GI | 121608510 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.285208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0681608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACC CACGAAGCAC CCTCCTCCGG ACATTCGCCG CCTGCGCGCT GGCCGCCGCC
AGCCTCGGCA TGGCGGGCAT CGCCGCTGCG CAGACCAAGC TCAAGTGGGC CCATGTCTAC
GAGATATCGG AACCGTTTCA CAAATACTCG GTGTGGGCCG GCGACGAGAT CAAAAGGCGC
ACCAACGGCC GCTACGAGGT GCAGGTGTTC CCGGCCTCCA CGCTCGGCAA GGAAGCCGAC
ATCAACCAGG GCCTGACGCT CGGCATGGTC GACATCATTT TGTCGGGTGC GAGCTTTGCC
GGGCGCATCT ACCCGCCGCT GGCGGTCTCG TACTTCCCCT TCATCTTCCG CGACGCCGAG
CACCAGTTGA AGTACGCCAA GAGCGACGTT TTCAACGAGC TCGCCAAGGG CTACGACGAC
AAGAGCGGCA ACCACATCAC TGCGCTCAGC TACTACGGCG CGCGCCATGT GACATCGAGC
GCGGCACGGC CGGTGCGCAA GCCCGAAGAC ATGAAGGGCC TGAAGATCCG CGTGCCCGAC
GCGCCGGCCT ACCTCGCCTT CCCGAAATCG CTGGGCGCCA ACCCGACGCC CATTGCCTTC
GCCGAGGTGT ACCTGGCCCT GCAGAACAAC ACGGTCGATG CGCAGGAGAA CCCGCTGCCC
ACCATCGAAG CCAAGAAGTT CTTCGAGGTG CAAAAGAACA TTTCGCTGAC CGGCCACATC
GTCGATTCGC TGCTCACGAT CTGCTCGGGG CAGCTATGGG CCAAGCTCTC GGCGGATGAA
AAGAAGATCT TCACCGAGGT GATGCAGGAG GCCGCCGAAA AGACCGGCCG GGAAATCATC
GCGTCCGAGG CGCGGCTGGC GCAGGAGTTC AAGAACCGGG GCAACCATGT GATCACGGTC
GACAGGGACG CCTTCCGCGC CGCCGTGCTC TTGGCCACCA AGCCGACGGA CCATGGCTAT
CGCCAACGAG ACTACGAGCG CATCCTGGCA CTCAAGTAA
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| Protein sequence | MSNPRSTLLR TFAACALAAA SLGMAGIAAA QTKLKWAHVY EISEPFHKYS VWAGDEIKRR
TNGRYEVQVF PASTLGKEAD INQGLTLGMV DIILSGASFA GRIYPPLAVS YFPFIFRDAE
HQLKYAKSDV FNELAKGYDD KSGNHITALS YYGARHVTSS AARPVRKPED MKGLKIRVPD
APAYLAFPKS LGANPTPIAF AEVYLALQNN TVDAQENPLP TIEAKKFFEV QKNISLTGHI
VDSLLTICSG QLWAKLSADE KKIFTEVMQE AAEKTGREII ASEARLAQEF KNRGNHVITV
DRDAFRAAVL LATKPTDHGY RQRDYERILA LK
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