| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1459 |
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| Symbol | |
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| ID | 4693152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 1631532 |
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| End bp | 1635035 |
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| Gene Length | 3504 bp |
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| Protein Length | 1167 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639849224 |
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| Product | CRISPR-associated helicase Cas3 family protein |
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| Protein accession | YP_996237 |
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| Protein GI | 121608430 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR02562] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00343785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTGC TGTTCGTCTC GCAATGCAGC AAACGCGCCT TGACGGAAAC CCGCCGCATC
CTCGATCAGT TTGCCGAGCG GCACGGCGAC CGCACTTGGC AAACCCCGAT CACCGCCCAT
GGGCTGGACA CGGTGCGCAG GCTGCTGCGC AAGACGGCGC GCAAAAACAC GGCGGTTGCC
TGCCACTGGA TTCGCGGCAA GAACCACAGC GAACTACTGT GGGTCGTGGG CGATGGCCGG
CAGTTCAATA CCGAGGGTGC CGTGCCCACC AACACCACCA CCAACGACAT ACTGCGCGCC
GAGGATGAGA ACACTTGGCA CCACCTGCCG CTGATGTCGG CGCTGACCGC CCTGGCGGCG
CTGATGCACG ATTTGGGCAA GGCCACGCAA GCGTTTCAGG AGCGGCTGCA CAACCCTGGC
CGCAGCGAGC GCAACCACTA CCGGCACGAA TGGGTGTCGG TGCGCCTGTT CCAGGCCTTT
GTCGGCAAGG ATGACGATGC GACCTGGCTG GCCCGCCTGG CCGACGGCGA CGGTCTGGAT
GGCGCCGCGT TTGCCGCCCA GTGGCTGGAT CACTCCGGCG GGCGCTTGCT GCGGGATGGT
CTGGATGTTG AGACGGCGAA GGCGTGCCCG CCTTTTGCGC AACTCCCACC GCTCGCGCAG
GCCGTGGCAT GGCTGGTGCT CACGCACCAT CGCCTGCCCT GTCAGCCAGT CAGAAGCAAA
CACAGTGCGT CCGACGATGA CACGCCCGGT GCGAAATGGC GTCGCTTTGG CGCATGCCCC
TCGTCCGTCA ACATCGGTGC GTTGGAGAAC TTGCTGGCCC GAATCGACGC CGACTGGAAC
GAGCCACGCG AAAACCTGGC GCTCGCGCAG ATAAAAGCCT ACTGGCACTT CCCGCATGGC
CTGCCCGTGG CCCTGCCGCC CTGGCGCAAG CAAGCTGCGC GTTACGCCCG CAAACTGCAA
GCGCTGGCCA CGGCTGGCGC TGCCCCCTGC GCGCTGCACG ACCCGTTCAC CATGCATGTC
TCGCGCCTGT GCCTGATGCT GGCCGACCAT CATTACTCCA GCATCGATAT CAATGACGAG
GCGCGCCGCG CGCCGTACCT CAATGAGAGC TACCCGCTGT ATGCCAACAC CCGCGAGGGC
AAGCCCAACC AAACCCTGGA CGAACACCTG CTCGGCGTGC AAGCCCATGC AACGCTGATT
ACCCGCTCCC TGCCCACGCT GGCGCGCAGC CTGCCGGCGC TGCAAAACCA CCGCCGCCTG
AAAAAGCGCA GCAGCGACCC CCGCTTCCAG TGGCAAGACA AGGCCGCCGA CCTGGCCGCC
AGCGTGCGCC ACCGGGCCGA GACCCAAGGC GCCTTCATCG TCAACATGGC CTCCACCGGC
TGCGGCAAGA CGCTGGGCAA TGCGCGCATC ATGAATGCCC TGTCCGACCC GGCCACCGGC
CTGCGCTGCG CCTTCGCCAT CGGCCTGCGC ACGCTCACCC TGCAAACCGG CCGCAGCTTT
CGAGACGAAT TGGGGCTATC GGACGAGCAA CTCGCCATCA GAGTCGGCGG CAGCGCCAGC
CGCGCACTGT TTGACTATTG GGAGCAGCAG GCCGAAGCCA CCGGCTCTGC CTCGCACCAG
GCGCTGCTGG ACGAAGACGG GCAGGTGCTA TTCGAGGGCA ATGACCAGCA CCCGCTGCTG
CAACGCCTGA CCAGCGACCC GCAAGTACGC AGCCTGCTGA CCGCGCCCGT GCTGGCCTGC
ACCGTAGACC ACCTGACCCC CGCCACGGAA AGCCTGCGCG GCGGCCGCCA GATCGCACCC
ATGCTGCGCC TGATGAGCGG CGACCTGGTG CTCGACGAGC CGGACGACTT CGACATGGCC
GACCTGCCCG CGCTGACCCG CCTGGTGCAT TGGGCCGGGC TGCTGGGCGC GCGCCTGCTG
CTGTCATCGG CCACGCTGCC GCCCGCGCTG GTCCAGGGCC TGTACCTGGC CTACCGGGAC
GGACGCCAGG CTTTCCAGCG CCACCGCAGC CAGCGCCCCG ACGAGCCAGT CAACATCTGC
TGCCTGTGGA TCGACGAATT CCACCAGAGC GCCCAGGACT GCCCGGACAA GGAAGCCTTC
CGCAGCGCCC ACGCCAGCTT CGTCGACAAG CGCCTGGCCC AATTGGCCAA AACCGAAGTG
CGCCGCCTTG CCCGCATCGT CGCGCTACCT GAAGAATGGC GCGGGATGGA CGAAGCCGGT
CGGCGCAAGG ATTTCGCCCG TCTTGCGCTG GAGTGCGCAT GGACACTGCA CCAAGACCCA
CAAAACCACA GCATCGACTG CGCCAACGGC AAGCCGGAGA AGCGGATCAG CCTGGGCCTG
ATCCGCATGG CCAACATCGG CCCGCTGTTT GACGTGGCAC AGGCCATGTA CCGGCAAGGC
GCGCCCGCGC CGGGTGTGCG CGTGCACCTG TGCGTGTACC ACTCGCAGTT TCCCATGCTG
GTGCGCTCGG CCATGGAACA ACAACTCGAC GCCCTGCTCG ACCGCCGCCC GAAGCCGGAC
GGCACAGACC CGGTGCTGGG CCGGTCTGCG ATGCGCGCAC TGCTGGACAA GCATCCCGAA
CCAGACCAGT TATTCATCGT GCTCGGCAGC CCGGTCACCG AAGTCGGGCG CGACCATGAC
TACGACTGGG CCGTGGTGGA ACCCTCGTCG ATGCGCTCGC TGATACAACT GGCAGGCCGT
GTGCGCCGCC ACCGCCCTGG GGCTGTCAGT GCGGTGAATA TGCAGGTGCT GGACAGTAAT
CTGCGCCATT ACGAGCGCAA GCATTCTGGT GAGGCGGCGT TTTGCTGGCC GGGGTTTGAG
ATGGAGCGCG TCGATCCCAG GGCAGACAAA CCAACCGGAC AGGGGCCGCA CGAATCAGGC
TGGCTCTTTC ACTTGGAACA GCATGAATTG ATCCCGTTGC TGGAGTTGCC GAATCCGGAA
ATTTTCCGCA TCGACGCCAG CCCCCGTATC TCTGCCGCTG AGAAGCTCAA GCCAAGACAA
AGGTGGATTG ATCTGGAGCA TGCCCGCATG CGCGACACCA TGCTGGTCCG ATCAAAAACC
AACGAGTTCT TCACGCCCGT GAAACGCAAT GCAACGCTGC ATTGGAGCGG CGACCGCTAT
TTGTGGCTCA CGGGATTGCT GCCCCAGTTC CAGCGCTTTC GTGATGATTC GGCAGCGCCA
CGGGTGGATG TGGCCTGGTT GCCGGATGAG GACAACGAAA ACCGCTTGAT TCTGCACATG
ATCAAAGATG ACCACAACAG AGAAGGAAAA CTCTATGTGG AGGCAGAAAC AAGGCTGGAA
AGACTGGAGA TTCCCATGGG ATCAGGCATT GGCCCATGGC TGCAAATCTG TCTGTTGGAC
GAGTTGGCGG CCTTGGCCGA TTCCAAGGGA ATGTCATTGC GCAAGTGCGC GGAAAGATTT
GCCGTAGCCA GCTTGCCCAG ACACAACGAG CACTTGGGGT GGTACCATCA CGATGTTCTG
GGTTTTGCCA AGCAGAAAAA ATAA
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| Protein sequence | MNVLFVSQCS KRALTETRRI LDQFAERHGD RTWQTPITAH GLDTVRRLLR KTARKNTAVA
CHWIRGKNHS ELLWVVGDGR QFNTEGAVPT NTTTNDILRA EDENTWHHLP LMSALTALAA
LMHDLGKATQ AFQERLHNPG RSERNHYRHE WVSVRLFQAF VGKDDDATWL ARLADGDGLD
GAAFAAQWLD HSGGRLLRDG LDVETAKACP PFAQLPPLAQ AVAWLVLTHH RLPCQPVRSK
HSASDDDTPG AKWRRFGACP SSVNIGALEN LLARIDADWN EPRENLALAQ IKAYWHFPHG
LPVALPPWRK QAARYARKLQ ALATAGAAPC ALHDPFTMHV SRLCLMLADH HYSSIDINDE
ARRAPYLNES YPLYANTREG KPNQTLDEHL LGVQAHATLI TRSLPTLARS LPALQNHRRL
KKRSSDPRFQ WQDKAADLAA SVRHRAETQG AFIVNMASTG CGKTLGNARI MNALSDPATG
LRCAFAIGLR TLTLQTGRSF RDELGLSDEQ LAIRVGGSAS RALFDYWEQQ AEATGSASHQ
ALLDEDGQVL FEGNDQHPLL QRLTSDPQVR SLLTAPVLAC TVDHLTPATE SLRGGRQIAP
MLRLMSGDLV LDEPDDFDMA DLPALTRLVH WAGLLGARLL LSSATLPPAL VQGLYLAYRD
GRQAFQRHRS QRPDEPVNIC CLWIDEFHQS AQDCPDKEAF RSAHASFVDK RLAQLAKTEV
RRLARIVALP EEWRGMDEAG RRKDFARLAL ECAWTLHQDP QNHSIDCANG KPEKRISLGL
IRMANIGPLF DVAQAMYRQG APAPGVRVHL CVYHSQFPML VRSAMEQQLD ALLDRRPKPD
GTDPVLGRSA MRALLDKHPE PDQLFIVLGS PVTEVGRDHD YDWAVVEPSS MRSLIQLAGR
VRRHRPGAVS AVNMQVLDSN LRHYERKHSG EAAFCWPGFE MERVDPRADK PTGQGPHESG
WLFHLEQHEL IPLLELPNPE IFRIDASPRI SAAEKLKPRQ RWIDLEHARM RDTMLVRSKT
NEFFTPVKRN ATLHWSGDRY LWLTGLLPQF QRFRDDSAAP RVDVAWLPDE DNENRLILHM
IKDDHNREGK LYVEAETRLE RLEIPMGSGI GPWLQICLLD ELAALADSKG MSLRKCAERF
AVASLPRHNE HLGWYHHDVL GFAKQKK
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