Gene Veis_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1458 
Symbol 
ID4691282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1630077 
End bp1631429 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content60% 
IMG OID639849223 
ProductCRISPR-associated Csy1 family protein 
Protein accessionYP_996236 
Protein GI121608429 
COG category 
COG ID 
TIGRFAM ID[TIGR02564] CRISPR-associated protein, Csy1 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.89655e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA CCGACACCCC ATCGCATGAC AGCTTCAAAG CGGCAGTGCA AGCGTTCCTT 
CAGGAGCGCT TGGAGGCAAA GCTCGACAAG CTCAAGGATG ACGACCCCAA GCGCGAGGAA
GAGCGCAACA AATACCGGCC AACGGTCTGG ATTGAAGATG CTGCGCGGCG CGTGCAGCAA
ATCCAGGCTG TCACCCATTC CCTCAAACCC ATCCATCCCG ACGCCAGAGG CACCAATCTG
TATGTGGAGC CGGATAGCCT GCCCATGCTG ACCGAGTTGG GCAGCCACGC ACTGGGCAAA
GACTTTGCAC CTGATGTAAC AGGCAATGCA GCAGCGTTGG ACGTGTACAA ATTCCTGAAA
CTGCAAGTGG GCGAACGCAG CCTGCTCACC GCCTTGCAGG AAGAAGACCC GGCGGCCATG
CAGGTGCTGC ATGACGACGC GGCGCAAGCC AAGGCATTGC GCGACAAGTT GGTCGGCTTG
ACGCAGCCCG GTTCTGGCGG AGCCAGTTCG CACAGCCGGG CCAAGCAGTT GTATTGGCTG
ACCGGCAGCG ATGCTGCTGC CGACGACGAC TACGAACTAC TGGCCCCCTT GTTTGCCACG
TCGCTGGCCC ACCGCGTATA TGCCGATGTG CAAGAGGTCC GCTTTGGCGA AGCCAACAAG
GCCGCTCGTC AGGCATGGCG CGAACGCAAG GCGCATGACG GCGTGTTGGT GGACTATCCC
GGGCTAGCCA TGCAAAAGAT GGGCGGAACA AAGCCACAAA ACATCAGCCA ATTGAATAGT
GAGCGCGGCG GGGTGAACTA TTTGCTGGCC TCGTTGCCGC CCATTTGGAA GGTGACCGAG
CGGCGCCTGC CGGTCAATAC CGACTCGGTG TTCAAGCACC TGTACCCGCA GCGGCCCGAC
GTACAAAAAA CAGTGCGTGA ATTGCGCCGC TTCCTGGAAG AAGACCCCGA GCCGAACCTG
GCTACACGCG AACGCCGCGC AGCCTATGTC GAAACGCTGG TGAATGAACT GCTCAATCTG
GCAGGCGAGT TGCAACAAGG CTTGCCTGCA GGCTGGACGC TGAACGACAA GCGTTTCCAG
CAATTGGCGC CTGTGGAACA ACTGTGGCTG GACCCACGGC GCGCCACACT GCCCGATGAG
GACGACTTTG CCAAAGAATG GTTATGGCAG GACTGGCCCG CCGCCATCGC CAAGCGCTTT
GGCAACTGGC TCAACGACAA ACTGGCAGGC CGACTGCTGG TAGGCGATGT CGAGGCCCGC
GAATGGCAGC GTGCGCTGAT CGGTGAGGAC GATGGCTGGC GCGAAGCGCT GACCGAACAA
CGCAAACACA TTCATCAACA AAGGGGCCAG TGA
 
Protein sequence
MAKTDTPSHD SFKAAVQAFL QERLEAKLDK LKDDDPKREE ERNKYRPTVW IEDAARRVQQ 
IQAVTHSLKP IHPDARGTNL YVEPDSLPML TELGSHALGK DFAPDVTGNA AALDVYKFLK
LQVGERSLLT ALQEEDPAAM QVLHDDAAQA KALRDKLVGL TQPGSGGASS HSRAKQLYWL
TGSDAAADDD YELLAPLFAT SLAHRVYADV QEVRFGEANK AARQAWRERK AHDGVLVDYP
GLAMQKMGGT KPQNISQLNS ERGGVNYLLA SLPPIWKVTE RRLPVNTDSV FKHLYPQRPD
VQKTVRELRR FLEEDPEPNL ATRERRAAYV ETLVNELLNL AGELQQGLPA GWTLNDKRFQ
QLAPVEQLWL DPRRATLPDE DDFAKEWLWQ DWPAAIAKRF GNWLNDKLAG RLLVGDVEAR
EWQRALIGED DGWREALTEQ RKHIHQQRGQ