| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1458 |
|---|
| Symbol | |
|---|
| ID | 4691282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1630077 |
|---|
| End bp | 1631429 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639849223 |
|---|
| Product | CRISPR-associated Csy1 family protein |
|---|
| Protein accession | YP_996236 |
|---|
| Protein GI | 121608429 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02564] CRISPR-associated protein, Csy1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000589655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA CCGACACCCC ATCGCATGAC AGCTTCAAAG CGGCAGTGCA AGCGTTCCTT
CAGGAGCGCT TGGAGGCAAA GCTCGACAAG CTCAAGGATG ACGACCCCAA GCGCGAGGAA
GAGCGCAACA AATACCGGCC AACGGTCTGG ATTGAAGATG CTGCGCGGCG CGTGCAGCAA
ATCCAGGCTG TCACCCATTC CCTCAAACCC ATCCATCCCG ACGCCAGAGG CACCAATCTG
TATGTGGAGC CGGATAGCCT GCCCATGCTG ACCGAGTTGG GCAGCCACGC ACTGGGCAAA
GACTTTGCAC CTGATGTAAC AGGCAATGCA GCAGCGTTGG ACGTGTACAA ATTCCTGAAA
CTGCAAGTGG GCGAACGCAG CCTGCTCACC GCCTTGCAGG AAGAAGACCC GGCGGCCATG
CAGGTGCTGC ATGACGACGC GGCGCAAGCC AAGGCATTGC GCGACAAGTT GGTCGGCTTG
ACGCAGCCCG GTTCTGGCGG AGCCAGTTCG CACAGCCGGG CCAAGCAGTT GTATTGGCTG
ACCGGCAGCG ATGCTGCTGC CGACGACGAC TACGAACTAC TGGCCCCCTT GTTTGCCACG
TCGCTGGCCC ACCGCGTATA TGCCGATGTG CAAGAGGTCC GCTTTGGCGA AGCCAACAAG
GCCGCTCGTC AGGCATGGCG CGAACGCAAG GCGCATGACG GCGTGTTGGT GGACTATCCC
GGGCTAGCCA TGCAAAAGAT GGGCGGAACA AAGCCACAAA ACATCAGCCA ATTGAATAGT
GAGCGCGGCG GGGTGAACTA TTTGCTGGCC TCGTTGCCGC CCATTTGGAA GGTGACCGAG
CGGCGCCTGC CGGTCAATAC CGACTCGGTG TTCAAGCACC TGTACCCGCA GCGGCCCGAC
GTACAAAAAA CAGTGCGTGA ATTGCGCCGC TTCCTGGAAG AAGACCCCGA GCCGAACCTG
GCTACACGCG AACGCCGCGC AGCCTATGTC GAAACGCTGG TGAATGAACT GCTCAATCTG
GCAGGCGAGT TGCAACAAGG CTTGCCTGCA GGCTGGACGC TGAACGACAA GCGTTTCCAG
CAATTGGCGC CTGTGGAACA ACTGTGGCTG GACCCACGGC GCGCCACACT GCCCGATGAG
GACGACTTTG CCAAAGAATG GTTATGGCAG GACTGGCCCG CCGCCATCGC CAAGCGCTTT
GGCAACTGGC TCAACGACAA ACTGGCAGGC CGACTGCTGG TAGGCGATGT CGAGGCCCGC
GAATGGCAGC GTGCGCTGAT CGGTGAGGAC GATGGCTGGC GCGAAGCGCT GACCGAACAA
CGCAAACACA TTCATCAACA AAGGGGCCAG TGA
|
|---|
| Protein sequence | MAKTDTPSHD SFKAAVQAFL QERLEAKLDK LKDDDPKREE ERNKYRPTVW IEDAARRVQQ
IQAVTHSLKP IHPDARGTNL YVEPDSLPML TELGSHALGK DFAPDVTGNA AALDVYKFLK
LQVGERSLLT ALQEEDPAAM QVLHDDAAQA KALRDKLVGL TQPGSGGASS HSRAKQLYWL
TGSDAAADDD YELLAPLFAT SLAHRVYADV QEVRFGEANK AARQAWRERK AHDGVLVDYP
GLAMQKMGGT KPQNISQLNS ERGGVNYLLA SLPPIWKVTE RRLPVNTDSV FKHLYPQRPD
VQKTVRELRR FLEEDPEPNL ATRERRAAYV ETLVNELLNL AGELQQGLPA GWTLNDKRFQ
QLAPVEQLWL DPRRATLPDE DDFAKEWLWQ DWPAAIAKRF GNWLNDKLAG RLLVGDVEAR
EWQRALIGED DGWREALTEQ RKHIHQQRGQ
|
|---|
| |