Gene Veis_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1401 
Symbol 
ID4694043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1562037 
End bp1563008 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content62% 
IMG OID639849168 
Productintegrase catalytic subunit 
Protein accessionYP_996182 
Protein GI121608375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATGG CCCTGCACAA GAACGCTCGC ACCACGCCGG CCGTGCGTGC CGAGATAGCC 
GCCAGTAGCC AGACCGCCAG TGTCTTGGCC CAGCGCTATG GCATCACCGA ACAGACGGTC
TACAAGTGGA AGAAACGCGA GGTCTTCGTG GACCGCTGTC ACACAGCCCA TCGCCTGCAG
ACCGTGCTCA CGCCTGCACA AGAGACCGTG GTGGTCCACC TGCGGCGCAC CTTGCTGCTG
CCCCTGGATG ATCTGCTGGC CGTTACGCGG GAGTTCCTCT GCCCTGATGT GTCACGCTCG
GGGCTGGACC GGTGCCTGCG CCGCCACGGG GTGGGCAACC TCGATGCCCT CAAGTCCCGG
GAGCCTACGG TGACCCACCA GGCATTCAAG AGCTACGAGC CGGGCTACGT GCACATGGAT
GTGAAATACC TGCCCCAGAT GCGCGACGAG AGCCGCCGGC GCTACCTGTT CGTCGCCATC
GACCGGGCCA CGCGATGGGT GTTCGTGCAG CTCAAGGCCA ACAAGACGGC CGCCAGTGCA
CAGGCATTCC TGAAGACATT GCACAAGGCT TGCCCGATCA GGATCAACAA GTTGCTGACC
GACAACGGCA AGGAGTTCAC CGACCGACTG TTTGCCAGCG GCGAGCGCCA AGCCAGTGGC
AACCATGAGT TCGACCAGTT GTGCCAGGCG CTGGACATAG AGCATCGGCT GACCAAGCCC
AGGACGCCGA GAACCAACGG CATGGTCGAG AGGTTCAATG GTCGCATAGC CGATGTCCTG
AAGACCCACA GGTTCGACAG CCGCGAGGAC ATGGAGCAGA CCTTGCTGCG CTATGTGGCC
TTGTACAATC ACCAACTGCC GCAGTCAGCG CTGGGCAGCA AAACGCCTAT GCAGGCCATG
AAAGAGTGGC ATCAGCAGCA CCCGCATCTG TTTCACAAGC GGCCATATGA TCGTCCGGGA
TGCGACACCT AA
 
Protein sequence
MSMALHKNAR TTPAVRAEIA ASSQTASVLA QRYGITEQTV YKWKKREVFV DRCHTAHRLQ 
TVLTPAQETV VVHLRRTLLL PLDDLLAVTR EFLCPDVSRS GLDRCLRRHG VGNLDALKSR
EPTVTHQAFK SYEPGYVHMD VKYLPQMRDE SRRRYLFVAI DRATRWVFVQ LKANKTAASA
QAFLKTLHKA CPIRINKLLT DNGKEFTDRL FASGERQASG NHEFDQLCQA LDIEHRLTKP
RTPRTNGMVE RFNGRIADVL KTHRFDSRED MEQTLLRYVA LYNHQLPQSA LGSKTPMQAM
KEWHQQHPHL FHKRPYDRPG CDT