| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1334 |
|---|
| Symbol | |
|---|
| ID | 4690412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1479282 |
|---|
| End bp | 1480220 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639849105 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_996119 |
|---|
| Protein GI | 121608312 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.215207 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000886879 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACTT GCCCCGCCGC GCCGCGCCGC TGGCTCAGCC CGCGCCACCT GCTGTGGGCT
TCGGTGGCCG TGGCGCTGCT CACCATTGTG CTCAAGACGC TGGCCTGGCA TGTCACCGGC
TCGGTGGGTC TGCTGTCGGA CGCAATGGAG TCGTTCGTGA ACCTGGCCGG CGCCATGTTT
GCGCTGGCGA TGGTGACGGT GGCGCAGCGC CCGGCCGATG ACGACCATCC CTATGGCCAC
CACAAGGCGG AATACTTTTC CTCCGGCTTC GAGGGCGTGC TGATCGTGGG CGTGTCGGTG
GGCATCCTGT GGGCGGCCGG GTACCGGCTG CTGGAGCCGC AGCCGATCGC GCAGCCCGGC
TGGGGCATGG GACTGTCGCT GCTCAGTTCG GCGCTCAATG GCCTGCTGGC CTGGATGATG
CTGCGCTCGG CGCGCGAGCA CCGCTCGGTC GCGCTGGAGG CCGACGCCCG CCACCTCGTC
ACCGATGTCT GGACCTCGGC CGGCGTGCTG GCCGGCATTG CCGGCGTGGC CCTGACCGGC
TGGCTCTGGC TGGACGCGCT GGCGGCCATC GCCGTGGCGC TGAACATCCT CAAAGAAGGC
GCAACGCTGG TGTGGCGCTC GTCCCAGGGC CTGATGGACA GCGCCGTGGA ACCCGCCGTG
CAGGCCCGCA TCGACAGCAC GCTGCGACAG TTCGTGCAAG CGCAGCCGCC CGGGGCCTTG
CGCTTCGACC ATGTGATTAC CCGCCGCGCA GGCCAGCGCC AGTTCGTCGA CCTGCACCTG
CATCTGCCCG CCGACTGGAC CTTGGGCCAG GCCGCCACGC TGCGCGGCCA GCTCGAGCAG
TCCTTGATGA GCGCCATGCC CGGCCTGCGC GCCACCATCG AACTGTTGCC GACCGATGTC
GAGGCGCTCG GTGATCCGGG GGCGGCAGCG CGCTGCTGA
|
|---|
| Protein sequence | MPTCPAAPRR WLSPRHLLWA SVAVALLTIV LKTLAWHVTG SVGLLSDAME SFVNLAGAMF
ALAMVTVAQR PADDDHPYGH HKAEYFSSGF EGVLIVGVSV GILWAAGYRL LEPQPIAQPG
WGMGLSLLSS ALNGLLAWMM LRSAREHRSV ALEADARHLV TDVWTSAGVL AGIAGVALTG
WLWLDALAAI AVALNILKEG ATLVWRSSQG LMDSAVEPAV QARIDSTLRQ FVQAQPPGAL
RFDHVITRRA GQRQFVDLHL HLPADWTLGQ AATLRGQLEQ SLMSAMPGLR ATIELLPTDV
EALGDPGAAA RC
|
|---|
| |