| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1263 |
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| Symbol | rpsJ |
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| ID | 4690465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 1405463 |
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| End bp | 1405774 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639849035 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_996049 |
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| Protein GI | 121608242 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0110329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAAGC AAAAAATCCG CATCCGCCTG AAGGCATTCG ATTACAAGCT GATCGACCAG
TCCGCAGCCG AGATCGTCGA CACCGCCAAG CGCACCGGCG CCATCGTCAA GGGCCCCGTG
CCCTTGCCAA CGCGCATGAA GCGTTTTGAC ATCCTGCGCT CGCCGCATGT CAACAAGACC
AGCCGCGACC AGCTCGAAAT CCGCACGCAC CAGCGCCTGA TGGACATCGT CGACCCCACC
GACAAGACGG TGGACGCACT GATGAAGCTC GACCTGCCTG CGGGCGTGGA TGTCGAAATC
AAGCTGCAAT GA
|
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| Protein sequence | MSKQKIRIRL KAFDYKLIDQ SAAEIVDTAK RTGAIVKGPV PLPTRMKRFD ILRSPHVNKT
SRDQLEIRTH QRLMDIVDPT DKTVDALMKL DLPAGVDVEI KLQ
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