Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1237 |
Symbol | |
ID | 4690990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1373857 |
End bp | 1374456 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639849010 |
Product | dihydrodipicolinate synthetase |
Protein accession | YP_996024 |
Protein GI | 121608217 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCGC AAGAACTCAA AAGCGTGCTG CAAGCCGGCC TGCTCTCGTT CGCGTTGACC GACTTCGACA GCGAACTGCG TTTTGCCCCC AAGCCCTACA CCGAACGCCT GGAATGGCTA CAGCCCTACG GGGCCTCGGC GCCGTTTGCA GCCGCTGGCA CCGGCGAGTT CTTCTCACTG ACGCCGCAGG AATTTGGCGC CGTGGTGCAA GTGGCCGTCG AACGCTGCCG TGGCCGCACC CCCATCATTG CCGATGCCGA TGCCGATGCC GATGCCGGCG GCGGCACCTT GGCCGTCGGC TACGCACAGG AAGCCGAGCG CCTGGGCGCG CAGGGCATCT TGCTGCTGCC CCATTACCTG ACCGAAGCCA GCCAGGAAGG CTTGGTGGCC CATGTTTGCG AGCGCCTGAT ACGCGACTTC TTCCTGCCCT ACATCGCCCT GCGCAACCAG GGCCAGGGCT ATGCGGTGGC CATCGTGAAG GCGGGCGCCA CATTGGTCGG CCACGGCGCC GGCCCGGTGC GCCGCCCACC GCTGTCCGAC CTCAAGCCCG CCGAAGTCCA GGCACTGCGC GCGCTGCTGG TGCCGCTGGG AACGCAATAG
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Protein sequence | MTPQELKSVL QAGLLSFALT DFDSELRFAP KPYTERLEWL QPYGASAPFA AAGTGEFFSL TPQEFGAVVQ VAVERCRGRT PIIADADADA DAGGGTLAVG YAQEAERLGA QGILLLPHYL TEASQEGLVA HVCERLIRDF FLPYIALRNQ GQGYAVAIVK AGATLVGHGA GPVRRPPLSD LKPAEVQALR ALLVPLGTQ
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