Gene Veis_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1220 
Symbol 
ID4693728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1355089 
End bp1355778 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content69% 
IMG OID639848994 
Productcarboxymethylenebutenolidase 
Protein accessionYP_996008 
Protein GI121608201 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACAAA GTGTCGATCT GATGGGCGCT GACGGTTTCG TGCTGCCCGC CTGGGTGGCC 
ACCCCCGCAG GCGCGCCCCG TGGCGCCGTG GTGCTGCTGC AGGAAATCTT TGGCGTGAAC
GCGCATATCC GCTCGGTGGC CGAGCGCTTT GCAGCCAGCG GCTATCTGGC CGTGGCGCCG
GCGCTGTTCG CCCGCATCGA GCCCGCAGTC GAACTGGGCT ATGGGCCTGA GGATATGCAG
GCCGGCATGG CCTTGAAGGC GGCGGTCGAG GCGCTGCCCG CTGCGGGTGT GATGCCGGAC
ATTCAGGCGG CCATCGACTA CGCGGCGCAG CACAGTGGCC GCAAGGTGGG CATTCTGGGC
TTTTGCTGGG GCGGCCTGCT CAGTTGGCGC GCGGCCTGTA CGCTCCGGGG GCTGTCGGCG
GCGGTGCCTT ATTACGGCGG GGGGATGACC ACGGCCGATG AAGTGGCGCG CAAGCCCCTG
GTGCCCGTGC TGGCCCATTT CGGCGAGCGC GACCCCTGGA TCGCGCTGGC TGGCGTGCAG
GCCTTTGCCT TGGCCCACCC CGAAGTCGTG GTGCAAACCT ATCCGGCCGA CCATGGCTTC
AACTGCGACC AGCGCGGCAG CTACCACGAG CCATCGGCCG TGACGGCGCA TGACCGGACG
CTGGCATTCC TGGGCCAGCA CCTGGGCTGA
 
Protein sequence
MGQSVDLMGA DGFVLPAWVA TPAGAPRGAV VLLQEIFGVN AHIRSVAERF AASGYLAVAP 
ALFARIEPAV ELGYGPEDMQ AGMALKAAVE ALPAAGVMPD IQAAIDYAAQ HSGRKVGILG
FCWGGLLSWR AACTLRGLSA AVPYYGGGMT TADEVARKPL VPVLAHFGER DPWIALAGVQ
AFALAHPEVV VQTYPADHGF NCDQRGSYHE PSAVTAHDRT LAFLGQHLG