| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1194 |
|---|
| Symbol | |
|---|
| ID | 4694223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1327114 |
|---|
| End bp | 1328475 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639848969 |
|---|
| Product | peptidase U32 |
|---|
| Protein accession | YP_995983 |
|---|
| Protein GI | 121608176 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG CCCCGGAACT GCTGCTGCCC GCTGGCTCGC TCGACAAGAT GCGCGCCGCG
TATGACTTTG GCGCCGACGC CGTGTACGCG GGCCAGCCGC GCTATTCGCT GCGCGCGCGC
AACAACGAAT TTCGCCTCGA ACAAATCCGC CAGGGCATTG ACGAGGCCCA TGCCCGCGGC
AAAAAGTTCT TCGTGACCAG CAACCTGATC GCGCACAACG ACAAGCTGCG CACTTACCTG
CGCGACATCG AGCCCGTGAT AGCCCTGCGG CCGGACGCGC TGATCATGGC CGACGCGGGC
CTGATCATGA TGGTCAAGGA CAAATGGCCC GAGGTGCCCG TGCACCTGTC GGTGCAGGCC
AACACCACCA ACTCGGCGGC CGTCAAGTTC TGGCAAAGGA TGGGCGTGCA GCGCATCATC
TTGTCGCGCG AACTGAGCCT GGACGAGATC GGGCAAATCC GCCAGCAATG CCCCGACATG
GAGTTGGAAG TATTCGTGCA CGGCGCACTG TGCATTGCGT ATTCGGGCCG CTGCCTGCTC
AGCGGCTACT TCAACCACCG CGACCCCAAC CAAGGCACCT GCACCAACGC CTGCCGCTGG
AGCTACGCCA CCCACGACGC CGACACCGAC CCGAATACCG GCGAGGCCCG CGCCCAAAAA
ATGGCCACCG ACTTCCACTT CGCCGCCGCG CAGCAAGAGG CCGAGCAAGC ATTTTCCACC
TGCGGCGACG GCGCGCGCCA CCCGGCCGCC GACAAGGTCT ACCTGCTCGA AGAAGCCGGC
CGCCCCGGCC AGCACATGCC GATCATGGAA GACGAGCACG GCACCTACAT CATGAACAGC
AAAGACCTGC GCGCCGTCGA ACATGTGGCG CGCCTGGCCG CCATGGGCGT GGACTCGCTC
AAGATCGAAG GCCGCACCAA AAGCCTGTAC TACGTGGCCC GCACCGCGCA GGTCTACCGC
CGCGCCATCG ACGACGCCAT GGCCGGGCGG CCCTTCAACC CCGAGCTGCT GCTCGAACTC
GAGGGCTTGT CCAACCGCGG CTACACCGGC GGCCTGCTGG AGCGCCGGCC CAGCCAAGAC
TATCAAAACT ACCTCAGCGG GCACTCGCAG ACCCGGCGCA GCCAGTTCGT CGGCGCAGTG
CGCGCCTGGG CCGATGGTTG GGCCGAGATC GAAACCAAAA ACCACTTCCA GCTCGGCGAC
CGGCTGGAGA TCATCCACCC CCAAGGCAAC CGCAGCATTC AACTCGAACG CATGTTCAAC
CTCGCCGGCG AGCCCATCAC CGTAGCCCCG GGCAGCCCGC TGCGCGTGCG CATCCCGCTC
GACGGCCCGG TGGATGGGGC GCTGATTGCG CGGTTGGTCT GA
|
|---|
| Protein sequence | MTTAPELLLP AGSLDKMRAA YDFGADAVYA GQPRYSLRAR NNEFRLEQIR QGIDEAHARG
KKFFVTSNLI AHNDKLRTYL RDIEPVIALR PDALIMADAG LIMMVKDKWP EVPVHLSVQA
NTTNSAAVKF WQRMGVQRII LSRELSLDEI GQIRQQCPDM ELEVFVHGAL CIAYSGRCLL
SGYFNHRDPN QGTCTNACRW SYATHDADTD PNTGEARAQK MATDFHFAAA QQEAEQAFST
CGDGARHPAA DKVYLLEEAG RPGQHMPIME DEHGTYIMNS KDLRAVEHVA RLAAMGVDSL
KIEGRTKSLY YVARTAQVYR RAIDDAMAGR PFNPELLLEL EGLSNRGYTG GLLERRPSQD
YQNYLSGHSQ TRRSQFVGAV RAWADGWAEI ETKNHFQLGD RLEIIHPQGN RSIQLERMFN
LAGEPITVAP GSPLRVRIPL DGPVDGALIA RLV
|
|---|
| |