Gene Veis_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1167 
Symbol 
ID4693173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1290066 
End bp1290980 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content65% 
IMG OID639848943 
Productcytochrome c oxidase, cbb3-type, subunit III 
Protein accessionYP_995957 
Protein GI121608150 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID[TIGR00782] cytochrome c oxidase, cbb3-type, subunit III 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACT TCACCAGCAA TTTCTGGTCG GTCTTTGTGA CCACGCTGAC CCTGGTCGCC 
ATCGTCGCCT GCGCGCTGCT GCTTTGGATG GCAGGCCGCA GAAAGGTGGT GGCCCATGCC
GACAACACCA CCGGCCATCT CTGGGATGTG GACCTGGCGG AAATGAACAA CCCCCTGCCG
CGGTGGTGGG TGTGGCTGTT CCTCATGACC CTGCTCTTCG GTCTGGCCTA CCTGGCGGCA
TTCCCCGGTC TTGGCAGCTT TGCCGGCCGG CTCGGCTGGA GCATGCAGGG CGAGTACGAG
GCTGAAATGG CCAAGGCCCG GGCCAATCTG GAACCGCTGT ATGCGCGCTT TGCGTCGATG
ACGCCGGAAC AAGTGGCCGC AGACCCGCAA GCCCATGCGA TGGGTGAGCG CTTGTTCATG
AACAACTGTG CGCAATGCCA TGGCTCGGAC GCGCGCGGCA GCAAGGGTTT TCCGGACCTG
ACCGATGCGG ACTGGCTGCA TGGCGGCACG CCCGAGAAAA TCCGCGAAAC GCTGACGCAG
GGGCGCATCG GCAACATGGC GCCGCTGGCG GCTGCGGTCG GCACCCCGGA GGATGTGCGC
AACCTGTCGC ACTATGTGCT GAGCCTTTCG GGCAGTCCAC ACGACTCGCT GCGGGCCTCG
CTGGGCAAGC CGAAGTTCGT CACCTGTGCC GCTTGCCACG GCATGGACGG CAAGGGCAAC
CAGGCTCTGG GCGCGCCCAA CCTGACAGAC GACATCTGGC TGCATGGCTG GGGTGAGGCG
ACCATTGCCG AGATGATCAA CAACGGCAAG GTCAACCAGA TGCCGGCGCA GGAGCACAAG
CTGACCGAGG CGCAGATCGG CGTGCTGTCG GCCTATGTCT GGGGCCTGTC GAACAAGCCC
GGTGCGGCAC GCTGA
 
Protein sequence
MSDFTSNFWS VFVTTLTLVA IVACALLLWM AGRRKVVAHA DNTTGHLWDV DLAEMNNPLP 
RWWVWLFLMT LLFGLAYLAA FPGLGSFAGR LGWSMQGEYE AEMAKARANL EPLYARFASM
TPEQVAADPQ AHAMGERLFM NNCAQCHGSD ARGSKGFPDL TDADWLHGGT PEKIRETLTQ
GRIGNMAPLA AAVGTPEDVR NLSHYVLSLS GSPHDSLRAS LGKPKFVTCA ACHGMDGKGN
QALGAPNLTD DIWLHGWGEA TIAEMINNGK VNQMPAQEHK LTEAQIGVLS AYVWGLSNKP
GAAR