| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1127 |
|---|
| Symbol | |
|---|
| ID | 4691649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1247060 |
|---|
| End bp | 1247461 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639848903 |
|---|
| Product | PilT domain-containing protein |
|---|
| Protein accession | YP_995917 |
|---|
| Protein GI | 121608110 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.539233 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCT ACATGCTCGA CACCAATATG TGCATTTACC TGATGAAGCA TCAGCCCGAG
GAAGTCTCTC GCCGCTTCGC CCAGTGCTAC GTTGGGGATG TGCTCATGTC TGCCATCACT
TTTGCCGAGC TTGAATTCGG GGTTTCGGTT TGCCCTGATC CTGACCGGGA GCGCCGAAAT
CTCGATGCGC TCATCGAACT GATGGAAGTC GAGCCATTCG ATACCGCAGC CGCTCGCTCC
TACGGCCCGG TTCGCAGCGC AACGAGGCAG AGGAAGTCAG ACCACCTGGA CAAACTCATC
GCCGCCCACG CGATTGCGCT GGGAGCGACC TTGGTCACGA ACAATGAGCG CGACTTCGCG
CCTTACCCAG GCTTGATCGT CGAAAACTGG CTGAAGCATT GA
|
|---|
| Protein sequence | MPRYMLDTNM CIYLMKHQPE EVSRRFAQCY VGDVLMSAIT FAELEFGVSV CPDPDRERRN
LDALIELMEV EPFDTAAARS YGPVRSATRQ RKSDHLDKLI AAHAIALGAT LVTNNERDFA
PYPGLIVENW LKH
|
|---|
| |