Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1126 |
Symbol | |
ID | 4691972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 1246077 |
End bp | 1246847 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639848902 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_995916 |
Protein GI | 121608109 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.560402 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCT CTGAAGCCCA GATCATGGCC TGGCTGTCGC CTGTGCTGTG GCCCTTCCTG CGGGTGCTGG CCCTGTTCTC GGTGGCGCCG GTGTTCTCGG CGCGGCAACT GCCGCTGCGC GCCAAGATCG GCCTGGCCTT CCTGGTGGCG CTATGCGCCC AGGGGGTGCT GACCGATCAG CCCGTCATCA GCGTCAATGG CCGCGAGGCA TTGGGCGCGG TGGCGCAGCA GGTCGCCGTG GGGCTGGCCA TCGGCTTTGC GCTGCGCCTG GTATTTACCG CCGTGGAGTT GGCCGGTGAA ATCATCGGTT TGCAGATGGG GCTGAACTTC GCGTCGTTTT TCGACCCCGT AGCCCATGCG CAGATCAGCG CCGTGACCCG CTTTTTCGAC AACCTGGTGC TGCTGCTGTT CATCGTCGGC AACGGCCATT TGCTGGTGCT GATGGCGGTG GTCGATAGCT TTGACCGCTT TCCGGTCGAC GGCAATTTCC TGCAAGCGCT CGGGCAGATG CGGCTGCACA CGCTGGGGTC GGCCATATTT TCCAGCGCCC TGTGGATCGC CTTGCCGATG ATCGCGCTGC TGCTGTTCGT CAATCTGACG CTGGGCATCA TCTCGCGGGT TGCGCCCCAG ATGAACATCT ACGCCGTGGG CTTTCCGGTC ACGCTCACGG TGGGCCTGTT GGGCATCACG GCCACATTGC CGATGCTGGA ATCACCCGTG CTGGCGCTGA TGCAGCAAGC GGTGGAACTG TTTGTCACGC AGCAGCGCTA G
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Protein sequence | MTFSEAQIMA WLSPVLWPFL RVLALFSVAP VFSARQLPLR AKIGLAFLVA LCAQGVLTDQ PVISVNGREA LGAVAQQVAV GLAIGFALRL VFTAVELAGE IIGLQMGLNF ASFFDPVAHA QISAVTRFFD NLVLLLFIVG NGHLLVLMAV VDSFDRFPVD GNFLQALGQM RLHTLGSAIF SSALWIALPM IALLLFVNLT LGIISRVAPQ MNIYAVGFPV TLTVGLLGIT ATLPMLESPV LALMQQAVEL FVTQQR
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