Gene Veis_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1126 
Symbol 
ID4691972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1246077 
End bp1246847 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content64% 
IMG OID639848902 
Productflagellar biosynthetic protein FliR 
Protein accessionYP_995916 
Protein GI121608109 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1684] Flagellar biosynthesis pathway, component FliR 
TIGRFAM ID[TIGR01400] flagellar biosynthetic protein FliR 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.560402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCT CTGAAGCCCA GATCATGGCC TGGCTGTCGC CTGTGCTGTG GCCCTTCCTG 
CGGGTGCTGG CCCTGTTCTC GGTGGCGCCG GTGTTCTCGG CGCGGCAACT GCCGCTGCGC
GCCAAGATCG GCCTGGCCTT CCTGGTGGCG CTATGCGCCC AGGGGGTGCT GACCGATCAG
CCCGTCATCA GCGTCAATGG CCGCGAGGCA TTGGGCGCGG TGGCGCAGCA GGTCGCCGTG
GGGCTGGCCA TCGGCTTTGC GCTGCGCCTG GTATTTACCG CCGTGGAGTT GGCCGGTGAA
ATCATCGGTT TGCAGATGGG GCTGAACTTC GCGTCGTTTT TCGACCCCGT AGCCCATGCG
CAGATCAGCG CCGTGACCCG CTTTTTCGAC AACCTGGTGC TGCTGCTGTT CATCGTCGGC
AACGGCCATT TGCTGGTGCT GATGGCGGTG GTCGATAGCT TTGACCGCTT TCCGGTCGAC
GGCAATTTCC TGCAAGCGCT CGGGCAGATG CGGCTGCACA CGCTGGGGTC GGCCATATTT
TCCAGCGCCC TGTGGATCGC CTTGCCGATG ATCGCGCTGC TGCTGTTCGT CAATCTGACG
CTGGGCATCA TCTCGCGGGT TGCGCCCCAG ATGAACATCT ACGCCGTGGG CTTTCCGGTC
ACGCTCACGG TGGGCCTGTT GGGCATCACG GCCACATTGC CGATGCTGGA ATCACCCGTG
CTGGCGCTGA TGCAGCAAGC GGTGGAACTG TTTGTCACGC AGCAGCGCTA G
 
Protein sequence
MTFSEAQIMA WLSPVLWPFL RVLALFSVAP VFSARQLPLR AKIGLAFLVA LCAQGVLTDQ 
PVISVNGREA LGAVAQQVAV GLAIGFALRL VFTAVELAGE IIGLQMGLNF ASFFDPVAHA
QISAVTRFFD NLVLLLFIVG NGHLLVLMAV VDSFDRFPVD GNFLQALGQM RLHTLGSAIF
SSALWIALPM IALLLFVNLT LGIISRVAPQ MNIYAVGFPV TLTVGLLGIT ATLPMLESPV
LALMQQAVEL FVTQQR