| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1115 |
|---|
| Symbol | |
|---|
| ID | 4693027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1238022 |
|---|
| End bp | 1238765 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639848893 |
|---|
| Product | flagellar assembly protein FliH |
|---|
| Protein accession | YP_995907 |
|---|
| Protein GI | 121608100 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.222897 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGGATGA CACCTTCGTC TAGCCCGCAT CCTGGCCTGC GCTTCATTCC CCGCGAGGCG
CTGGGCGCTG TCACGCCGTG GAAGTTTGGC GCGGTCGATG GCTCCGACCT GATCGCGCCC
GCGCCTGCGC CCGAGCCGGT GGCGCAAATC CCGGTCGGGA TCGACACCGC TGCGCAGCAG
GCGCTGATCG AGCAGGCCCG CGCCGAGGCC CATGCCGAGG GCTTTGCCCA GGGCCAGGAG
CAGACTGCGG CGGCATGGCA GCGCCGCATG GATGAATACC TTGCCGGGCA GGGGCGCACG
GCGGCGACCC GTTTGCAAGC GCTGCTGCAA ACGCTGGATG CGAGCCTGTC GGCGCTGCAG
CAGCAGATGG CGCAGCAACT GCTGGAGCTG GCCTGCGACA TCGCGCGCCA GGTGCTGCGC
CAGGAGCTAT CGGTCAACCC CCGCTCCTTG CTGCCCGTGG TGCGGCAGGC GCTGACCATG
CTGGTGACCG AGGGCCGGCC CGCCACCGTG CGCCTGAACC CGGCCGACCT CGAGGCGCTG
GCGCAGCCCT TGCGGGAGGC CGGCGATGCC CCGGGCGTGC ACTGGCTCGC CGACGCCGCC
GTGCCTGCCG GCGGCTGCCT GGTGGAGGCC GCCGGCGCCA TGGTCGATGG CCGCATCGAC
AAGCGCTGGC AGCGGGCCAT CGCGGCGCTG GGTTTGCAGT CGCCGTGGCA GGAAGGCGCG
GCAGGTGATG GCGATGAGCG TTGA
|
|---|
| Protein sequence | MGMTPSSSPH PGLRFIPREA LGAVTPWKFG AVDGSDLIAP APAPEPVAQI PVGIDTAAQQ
ALIEQARAEA HAEGFAQGQE QTAAAWQRRM DEYLAGQGRT AATRLQALLQ TLDASLSALQ
QQMAQQLLEL ACDIARQVLR QELSVNPRSL LPVVRQALTM LVTEGRPATV RLNPADLEAL
AQPLREAGDA PGVHWLADAA VPAGGCLVEA AGAMVDGRID KRWQRAIAAL GLQSPWQEGA
AGDGDER
|
|---|
| |