| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1113 |
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| Symbol | |
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| ID | 4692760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 1235323 |
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| End bp | 1237011 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639848891 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_995905 |
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| Protein GI | 121608098 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.132645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAAGCA AGATGTCGGC TGTTGCAGAG CTCCCCCCCG ATCCGCTCCC GCCGCCGCCG
ACGACGGGGC CGCTGTGGTG GCAGCGCCTG TCGGCGCTGA ACCGGGCGCA GCGCATGCGG
CTGGGTGCGG GCGTGGCGCT GCTGGTGCTG GCGGCTGTCG CGGCCCTGGT TCTGGGGCAC
CAGCCGGACT ATCGGGTGCT GTTTGGCAAC CTGAGCGACA AGGATGGCGG CACCATCGTG
GCCCAACTGT CGCAAATGAA TGTGCCCTAC CGGCTGGCCG AGGGCGGCGG CGCCATTTTG
GTCCCTGCCG ATCGGGTGCA CGAGGTGCGG CTGCGCCTGG CAAGCCAGGG TCTGCCCAAG
GGGTCGGTGG TCGGTTTCGA GCTGATGGAG TCGAGCAAAT TCGGGGTGAC GCAGTTTCAG
GAGCGGCTGA ACTTTCGGCG CGGCCTCGAG GGTGAGCTGA CGCGCTCGAT ACAGGCGCTG
TCGCCGGTGC AAAGCGCGCG CGTGCATCTG GCGCTGCCCG AGCAGAACGG GTTTTTCCGC
GAGCAGCAAA AGCCTTCGGC CTCGGTGCTG GTGAGTCTGT ATCCGGGCCG TTTTCTGGAG
CGCGCCCAGT TGGCCGGCAT CGTGCATCTG GTGGCGGCCA GCGTGCCCGA GATGGCGCCC
TCGGCGGTCA GCGTGCTCGA CGACACCGGC AAGCTGCTCT CGCGTTCGCC CGACGGCGCA
GCGGACGCCG AGGTGAATGC GCAGCAACTG CTGCATGTGC AGCGCATCGA GCAGCAGTAC
ACCCGCCGCA TCCTGGACAT TCTGGAGCCG GTGGTCGGCC GCGACAACGT CAAGGCGCAG
GTGACGGCCG ATGTCGATTT CACGCAGACC GAGTCGAGCT CCGAGCAGTT TCGCCCGAAC
CAGCAGCCGG AATCGGGCGC GGTGCGCAGC CAGCAACTGC TGGAAAGCAG GAGCGGCGCC
AACAAGCTGC CCACCGGCAT TCCGGGCGCG GTGAGCAATC AGCCGCCGGT GCCGTCCACG
GCCCCCATCA ATGGCCCCAA CCCGGCGCCC AACGCAGGCG GCCAGCAAGG CCCGGACGAG
CAGACCAACA AGCGTGAATC GACCACCAAC TACGAGCTCG ACCGGACGGT GCGCGTGGTG
CGCGGCAGCA CCGGGACCGT CAAGCGGCTC AGCGCTGCGG TGGTGGTCAA CTACCAGTCG
GTGCTGGACA AGGGCCGGGC CGTGAGCCGC GCGCTGACGC CCGAGCAGAT CGGGCAGATG
ACGGCGCTGG TGCGCGAAAG CATTGGCTTC GACAGCGCGC GCGGCGATTC GGTGAACCTG
ATGAACACCC CGTTCCAACT GACGGTGACG CCGCCCGAGG CACTGGCCTG GTGGCAGCGG
CCCGCGCTGA TCGATCTGGC CAAGACCCTG GCCTGGCCCG TGGGTGCGCT GCTGTTCGCT
GCGCTGGTGC TGCTGGGTCT GGTGTGGCCG GTGCTCAGGC CCCCCCGCGC CGTGGCGGGG
CGCCAACTCG ATGCGCTGGA GGCCGAGACC CCGGAGCGCC CGGCGTTGCC GGCACCGATC
ATCAGGAATG AGCCACTGCT GCCGACCCCC GAGCAGCTGC GTCTGCAAGA GGCGCGCGCG
CTGGCCCGGG AGAATCCGGC GGCCGTGGCC AATATCCTGA AGACCTGGCT CAGCGGCGAG
CCAGCCTGA
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| Protein sequence | MESKMSAVAE LPPDPLPPPP TTGPLWWQRL SALNRAQRMR LGAGVALLVL AAVAALVLGH
QPDYRVLFGN LSDKDGGTIV AQLSQMNVPY RLAEGGGAIL VPADRVHEVR LRLASQGLPK
GSVVGFELME SSKFGVTQFQ ERLNFRRGLE GELTRSIQAL SPVQSARVHL ALPEQNGFFR
EQQKPSASVL VSLYPGRFLE RAQLAGIVHL VAASVPEMAP SAVSVLDDTG KLLSRSPDGA
ADAEVNAQQL LHVQRIEQQY TRRILDILEP VVGRDNVKAQ VTADVDFTQT ESSSEQFRPN
QQPESGAVRS QQLLESRSGA NKLPTGIPGA VSNQPPVPST APINGPNPAP NAGGQQGPDE
QTNKRESTTN YELDRTVRVV RGSTGTVKRL SAAVVVNYQS VLDKGRAVSR ALTPEQIGQM
TALVRESIGF DSARGDSVNL MNTPFQLTVT PPEALAWWQR PALIDLAKTL AWPVGALLFA
ALVLLGLVWP VLRPPRAVAG RQLDALEAET PERPALPAPI IRNEPLLPTP EQLRLQEARA
LARENPAAVA NILKTWLSGE PA
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