Gene Veis_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1108 
Symbol 
ID4694112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1231902 
End bp1232669 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content64% 
IMG OID639848886 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_995900 
Protein GI121608093 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.135552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCG ATCCAACACC CCGGCATGCG CTGCTGGCCA CGGCCTGCGT CGCCGTGCTG 
GCCTTCCTGG CGCTGTGGGA GGGCACATGC CGCAGCGGCC TGGTCGATCC GGTCTTTTTG
CCGCCGCCGA GCGCCGTATG GGCGCGCGGC CTGGCCATGG CAAGCGATGG CGCGTTGCCC
GGGCATGTGC TTGCCTCGGC CCGGCGCGTG ATGACCGGAT TCCTGGCCGC CACGGTGGTC
GCGATTCCGC TGGGCATCTT TCTGGGCATG TCGCGCTATG CGCGCGCAGC CTTCGATCCC
ATTCTTTCCT TGCTCCGGCC CCTGCCTTCG ATGAGCTGGA TCCCGCTGTC GCTGCTGTGG
TTCGGCATCA CCGAAACGCA AAAGTACAGC ATCGTCTTCA TGGGCTGCTT TGCGCCGGCA
TTGGTCTACG TCATCGAAGC CACGCGCAAT GTCGACCCTG TGCTCATTCG CGCAGCACAA
AACCTGGGCG CCAGCCGCTG GCAGGTGATG CGCGAAGTGG TTCTGCCGGG CAGCCTGCCG
CAGATTCTGA GCGGGCTGAA GATCATTTTG GGCCTGGCCT GGACCTGCGT CATCTCCGCA
GAACTGGTCG CGGCGCGCGA AGGGCTTGGC TTTCTGATCA TGAACGGCAA AGAGTTCTTT
CAGACCGAGG TCGTGGTCCT GGGCATGGTC ATGATCAGCC TGACCGTGCT GCTCACCGAT
GTGGTGTTTC GCGCCATCGG GCGCAAGCTG CTGAGGTGGC AGCCATGA
 
Protein sequence
MNPDPTPRHA LLATACVAVL AFLALWEGTC RSGLVDPVFL PPPSAVWARG LAMASDGALP 
GHVLASARRV MTGFLAATVV AIPLGIFLGM SRYARAAFDP ILSLLRPLPS MSWIPLSLLW
FGITETQKYS IVFMGCFAPA LVYVIEATRN VDPVLIRAAQ NLGASRWQVM REVVLPGSLP
QILSGLKIIL GLAWTCVISA ELVAAREGLG FLIMNGKEFF QTEVVVLGMV MISLTVLLTD
VVFRAIGRKL LRWQP