| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1004 |
|---|
| Symbol | |
|---|
| ID | 4693404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1116863 |
|---|
| End bp | 1117825 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639848782 |
|---|
| Product | aminodeoxychorismate lyase |
|---|
| Protein accession | YP_995799 |
|---|
| Protein GI | 121607992 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCTTCG TATTGCTGGC CTCGGGGGGC CTGGCTTACT GGTGGCTGCA CCAACCGCTG
TGGACGGGCG CCCAGGCGCT GGAGTTGGCC ATCGAGCCTG GCGCCACGGC GCGCGCCGTG
GCCCGCGCCG TGGCGGCGGC CGGCGCGCGC ACCGATGCGC GCCTGCTGTA CGCCTGGTTT
CGTTTCTCGG GCCAGGGCCG GGCGATCAAG GCCGGCAATT ATGAGATTGC CCCCGGCACG
ACGCCCATTG CCTTGCTGCA GAAATTGGTC CGGGGCGAAG AAGCCCTGCG CACGCTGACG
CTGGTCGAGG GCTGGAACTG GCGCCAACTG CGCCAGGCGC TGGCCCGGCA GGAGCAGCTC
AGGCCGGACA GCGCCGCGCT CGACGACCAG GCGCTGATGG CGCAGATCGG TCGCCCGGGG
GTGGCCCCCG AGGGGCGGTT CTTCCCGGAC ACCTACACCT ACGCCAAAGG CTCCAGCGAC
CTGGCTTTGC TGCGCCGCGC GCTGCACGCG ATGGACCGGC AGTTGCAGGC CGCCTGGGCC
ATGCGCGCCG CAGACACGCC GCTGCAATCG GCCGAGCAGG CGCTGATTTT GGCCAGCATC
GTCGAAAAGG AAACCGGCCG CGCCAGCGAC CGCAGCCAGA TTGCCGGCGT TTTTGCCAAC
CGCCTGCGCG CCGGCATGCT GCTGCAAACC GACCCCACGG TGATCTACGG CCTGGGCGAA
AAGTTCGACG GCAACCTGCG CCGCCGCGAT CTGCAAGCCG ACACGCCCTG GAACACCTAC
ACCCGCGCCG GTCTGCCGCC CACGCCGATT GCGATGCCCG GCAAGGCCGC GCTGCTGGCC
GCCGTGCGCC CCGAGGCCAC GCGCGCGCTG TACTTTGTCG CCAAGGGCGA TGGCGGCAGC
CATTTCAGCG CCTCGCTGCA AGAGCACAAC CGCGCCGTCA ACCGCTATCA GCGCGGGCCG
TAG
|
|---|
| Protein sequence | MCFVLLASGG LAYWWLHQPL WTGAQALELA IEPGATARAV ARAVAAAGAR TDARLLYAWF
RFSGQGRAIK AGNYEIAPGT TPIALLQKLV RGEEALRTLT LVEGWNWRQL RQALARQEQL
RPDSAALDDQ ALMAQIGRPG VAPEGRFFPD TYTYAKGSSD LALLRRALHA MDRQLQAAWA
MRAADTPLQS AEQALILASI VEKETGRASD RSQIAGVFAN RLRAGMLLQT DPTVIYGLGE
KFDGNLRRRD LQADTPWNTY TRAGLPPTPI AMPGKAALLA AVRPEATRAL YFVAKGDGGS
HFSASLQEHN RAVNRYQRGP
|
|---|
| |