Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0952 |
Symbol | ipk |
ID | 4693681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1065840 |
End bp | 1066742 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639848731 |
Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
Protein accession | YP_995748 |
Protein GI | 121607941 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCCC TGTATGACCT GCCGGCCCCG GCAAAGCTGA ACCTCTTTTT GCACATCATC GGACGGCGCG CCGACGGGTA TCACCTGATC GAGTCGGTCT TCATGCTGAT CGACTGGTGC GATACCCTGC ATTTCGAGTG TCGTGCCGAC GGAGCAATTT CGCGCCAAGA CCTGGGCGCC CCGCTGCCCG CTGCCGACCT GAGCATACGG GCCGCCCATG CGCTGCGGGC GGCCACCGGC TGCAGGCAAG GCGCGCATAT CGGGCTGCTC AAACGCCTTC CCGCGCAAGC GGGCATCGGC GGTGGCTCGT CGGATGCCGC GACCACCTTG CTGGCACTGA ACCGGCTATG GGGTCTGGGC CTGTCGCTGT CGGCGCTGGA AAAGATCGGC GTGACGCTCG GTGCAGATGT TCCGTTTTTT GTACGCGGGC GCAACGCCCG GGTGGCGGGC ATCGGCGAGA TCATCACGCC GCTGGCGCAT GGACAACTGC CGCCGGCATG TTTTGCGGTC GTCAAGCCCG CTGCCGGTCT GGAGACGAAG GCCATTTTTT CCTCGCCCCT TCTGAAGCGC GCTTCGGGCA GTGCTACAAT CTCCGGCTTT GCTGCAGCCG ATTTCGGCCG GGATGGCGAC TGCTACCAGG ATGCCGATTT CTGCCGAAAT GACCTGCAGC CCGTTGCCCA GGCATTGTGC CCCGAGGTCA CCCAAGCCAT CGAATGGCTC AGAGCGCGCG GGTTGCAAGG CCGGATGACA GGCTCGGGCA GTGCGGTGTT TGCACAGATA CCACAGGCGC CCGACTTGGG TCACGTTGGT GACTTGGGGG CAGCCCCCGA AGGCTGGCAG GTCAGGGTCT GTGAGAATCT GATGCTCCAT CCTCTTGCAG GGTGGGCAGC AGACGAGGAT TGA
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Protein sequence | MQALYDLPAP AKLNLFLHII GRRADGYHLI ESVFMLIDWC DTLHFECRAD GAISRQDLGA PLPAADLSIR AAHALRAATG CRQGAHIGLL KRLPAQAGIG GGSSDAATTL LALNRLWGLG LSLSALEKIG VTLGADVPFF VRGRNARVAG IGEIITPLAH GQLPPACFAV VKPAAGLETK AIFSSPLLKR ASGSATISGF AAADFGRDGD CYQDADFCRN DLQPVAQALC PEVTQAIEWL RARGLQGRMT GSGSAVFAQI PQAPDLGHVG DLGAAPEGWQ VRVCENLMLH PLAGWAADED
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