Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0899 |
Symbol | |
ID | 4692251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 1001288 |
End bp | 1002004 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639848673 |
Product | ABC transporter related |
Protein accession | YP_995696 |
Protein GI | 121607889 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGTGC CGGCGCTTGA GGTGCGCGAC CTGACGGTCG GCTATGGCGA CAGGTCCGTG CTGCGCGGGC TTTCGATGAA AGTCGAGCCT GGCCAACTGG TGGCGCTGAT CGGGGCCAAC GGCGCCGGCA AGACAACGCT GCTGCGCAGC GTCTCGGGAC TGCTGCGGCC CGCTGGCGGA ACCATCTTGC TCGATGGCGT GCCATTGCAG GGCCAGCCGC CGCATCGCGT GGTCGAGAGC GGCTTCGTGC AATCGCCCGA AGGCAAGCAA CTGTTCCCGG GGATGTCGAT CCGCGAGAAC CTGCTGGTCG GCGCACACAA CCGGCGCGCG CGCGCCGGGC GCGAACAGAC CATGGCCGAG GTGTTCGCGC TGTTTCCGAT CCTGCAGGAG CGGCAAAGGC TGGTCGCTTC GACGCTATCG GGCGGCCAGC AGCAGATGCT CGCGGTCGGT CGTGCGCTGA TGGCCAAGCC GCGTGTGCTG GCGCTGGACG AACCCTCGCT GGGGCTGGCT CCGATCATGG TCGAGCGTTT GTTCGAGGCC ATACGGCGCA TTCGCGACCT GGGCGTGACG GTGCTGGTGA TCGAGCAGAA CGTCTTGCAG GTGCTGCAGA TGGCCGACTA CGGCTATGTG CTCGAACGCG GCGTCATTTC GCTGCAGGCA AGCGGGCCGC AATTGCTGGC CAACCCGTGC CTGCGATCGA CCTACCTTGG CCTGTAA
|
Protein sequence | MPVPALEVRD LTVGYGDRSV LRGLSMKVEP GQLVALIGAN GAGKTTLLRS VSGLLRPAGG TILLDGVPLQ GQPPHRVVES GFVQSPEGKQ LFPGMSIREN LLVGAHNRRA RAGREQTMAE VFALFPILQE RQRLVASTLS GGQQQMLAVG RALMAKPRVL ALDEPSLGLA PIMVERLFEA IRRIRDLGVT VLVIEQNVLQ VLQMADYGYV LERGVISLQA SGPQLLANPC LRSTYLGL
|
| |