Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0790 |
Symbol | |
ID | 4692170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 874485 |
End bp | 876179 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639848565 |
Product | thiamine pyrophosphate binding domain-containing protein |
Protein accession | YP_995588 |
Protein GI | 121607781 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000243733 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAGA TGAACGGCGC CGAGGCCATG GTGCGCATGC TGCAACTCAA TGGCGTCAAG CATATCTTCG GCCTCTGCGG CGACACCAGC CTGCCCTTCT ACGACGCTTT GGCCCGGCTG GACCACGGCA TGGAGCACAT CCTCACGCGC GATGAGCGCA GCGCCGCCTA CATGGCCGAT GCCTACGCCC GCGTGACCGG CAAAGTCGGC GTCTGCGAAG GCCCCAGCGG CGGCGGGGCC ACCTACCTGC TGCCTGGCCT GGTCGAGGCC AATGAATCCT CGATCGCCGT GCTGGGCATC ACCAGCGATG TCCCGGTCGG ATCGCGCGGC AAATACCCGC TCACCGAACT CGACCAGCAA GCGCTGTATC GACCGCTGAC GAAGTGGAAC GCCCGTGTCG ATCGCGTCGA TCAGCTCCCG GGCATCGTGC GCAGCGCGTT TCGCGCGATG ACCACAGGGC GTCCGGGAGC GGCGCATATC TGCCTGCCCC ATGACGTTCA AAAGCATGAG GCAGACGCGC AGGACATCTG GGCACAGCCC GGCCATGACC GCTTTCCGGC CATGCGCTAT GCAGCCGATC CGGCCGAGAT CGACACTGCC GCAGCCCGGC TGACCGCAGC GCAATCGCCC GTCATCATGT GCGGCGGCGG CCTGGTCATC TCCGGCGCCT GCGGCGAGCT CGACACCTTG GCCAGGCTGT TGAACGCGCC CGTGGTGACG ACGATCAGCG GACAAGGCAG CCTGGCAGAC ACGCACCCGC TCAACGCCGG CGTCGTTGGC GCCAATGGCG GCAGCCATGC CACGCGCGCC ATTCTCGGCA ACGCCGACCT GGTGCTGCTC ATCGGCTGCA GGGCCGGATC GACCTCGACC GAGCACTGGA CTTACCCGTC ACGACGAATC CCGGTGCTGC ATCTCGATGT CGATCCGATG GCGATTGCCG CCAACTACCG CACCGATGTC GCGCTCGTCG GGGACGCCCG GCTGACCTTG AGGGCGCTCA ATGCGCTGGT CCATGACCGC CTGGCGCAGC GGCCGCGCAG CGGAGCGGAC GGCGCGGCCA TTGCCGCAGC CGCGCGCGCG GCCAAGCACA AACACTTCCA GCCGCTGGCA GCCTCGCTGG ACCGGCCCAT CAAGCCCGAG CGCGTGGTGG ATGCGCTGAA CCGCCTGCTG CCCGGCAACG CGATCGTCGT CGCCGATCCC GGCACGCCTT GCCCGTACTT TTCGGCCTAC TTCAACGCGG CGACACCCGG ACGGCAATTC ATCACCAACC GGGCGCAAGG GGCGCTCGGA TTCGCAATGT CGGCGGGCAT CGGCGCCGCC ATCGGCCGAC CCGATTGCGT CGTGGTGTCG GTCATGGGCG ACGGCAGCTT CGGCTTTACC TGTGGCGAGA TGGAGACCAT GGTGCGGCGC AAGATTCCGG TCAAGATGGT GGTTTTCTCG AACTGCGTGT TCGGCTGGAT CAAGGCCAGC CAGAAGGCCG GGTACGGTGA GCGCTATTTC TCGGTGGACT TCGATCGCAC CGACCATGCG CGCGTCGCCG AAGCCTTTGG CCTCAAAGCC TGGCGCGTGC AAGACCCGGC GCAGCTCGAT GGCGCCATCG AGGCCGCATT GCGGCACGAC GGGCCGGCGC TGATCGATGT CATCTCACAG GAGTTGCAGG ATGCGGCAAC GCCCGTGAGC CAATGGATGG GTTGA
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Protein sequence | MTKMNGAEAM VRMLQLNGVK HIFGLCGDTS LPFYDALARL DHGMEHILTR DERSAAYMAD AYARVTGKVG VCEGPSGGGA TYLLPGLVEA NESSIAVLGI TSDVPVGSRG KYPLTELDQQ ALYRPLTKWN ARVDRVDQLP GIVRSAFRAM TTGRPGAAHI CLPHDVQKHE ADAQDIWAQP GHDRFPAMRY AADPAEIDTA AARLTAAQSP VIMCGGGLVI SGACGELDTL ARLLNAPVVT TISGQGSLAD THPLNAGVVG ANGGSHATRA ILGNADLVLL IGCRAGSTST EHWTYPSRRI PVLHLDVDPM AIAANYRTDV ALVGDARLTL RALNALVHDR LAQRPRSGAD GAAIAAAARA AKHKHFQPLA ASLDRPIKPE RVVDALNRLL PGNAIVVADP GTPCPYFSAY FNAATPGRQF ITNRAQGALG FAMSAGIGAA IGRPDCVVVS VMGDGSFGFT CGEMETMVRR KIPVKMVVFS NCVFGWIKAS QKAGYGERYF SVDFDRTDHA RVAEAFGLKA WRVQDPAQLD GAIEAALRHD GPALIDVISQ ELQDAATPVS QWMG
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