Gene Veis_0674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0674 
Symbol 
ID4692152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp753562 
End bp754368 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content67% 
IMG OID639848451 
ProductABC-2 type transporter 
Protein accessionYP_995474 
Protein GI121607667 
COG category[M] Cell wall/membrane/envelope biogenesis
[G] Carbohydrate transport and metabolism 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000817714 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000103692 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTGCGCAG CGCTCGCCGC TGATGTGCTG GCTGTCTGGC GCGCGCGCGC GCTGCTGTGG 
GTGTTGGTGC GCCGGGAGGT GGCGGCCAGA CATGCCGGCA CGGCGGCGGG CCTGGTCTGG
CCGTACTTGC AACCGCTGCT GACGGTCGCG GCCTATTACC TGGTGTTCGA CGTGGTGTTT
GCGATGCGCC TGGGTGCGGG TGCGCCAGCA CATGCGGTGG GCACTTTCCT GATCGTCGGC
GCGTTGCCCT GGATGGCTTT TTGTGATGCC GTCTCCCGGG GCATGGGCAG CCTGATCGAC
GCCGGGAGCC TGTTGCAAAA AAACGCCTTG CCGCCGGTGC TGTTCGCCAC CCGGGCGGTG
CTGGCCAGCG CCGTGATCTA TGGCCCGCTG CTGTTGGCGC TGGCGCTGGC CTACACGCCG
CTGCATGGCT GGCGGCCTGC CGTCGTCGCC GGCCTGCTGC CGTTGCTGGC GTTGCAGTTG
CTCTTGGGCT GGTTGCTGGG CTATTTGCTG GCCATCTTTG CTGCGGCGCT GCGCGATACG
GTTCAGGCGG TCGGGTTCAT GCTGTCGGTC GGTATTTTTC TCAGCCCGAT TTTGTTTCCG
CTGACCCTGT TTCCTGCCGC TTGGCGCTGG GTGCTGTGGT TGAACCCGAT GACGGCCCTG
GTGCTGGGCT ACCAGCAGTT GCTGCTGCAA GGCAACCTGC CGCCCCGGGA GGTCTGGGCC
GTGGCGGCGG TCTGGGTGCT GCTGCTGGCG TGGCTGCTCG ATTGGGTGCT CAGGCGCAGC
CGCGATCAAC TGGTGGATTG GTTATGA
 
Protein sequence
MCAALAADVL AVWRARALLW VLVRREVAAR HAGTAAGLVW PYLQPLLTVA AYYLVFDVVF 
AMRLGAGAPA HAVGTFLIVG ALPWMAFCDA VSRGMGSLID AGSLLQKNAL PPVLFATRAV
LASAVIYGPL LLALALAYTP LHGWRPAVVA GLLPLLALQL LLGWLLGYLL AIFAAALRDT
VQAVGFMLSV GIFLSPILFP LTLFPAAWRW VLWLNPMTAL VLGYQQLLLQ GNLPPREVWA
VAAVWVLLLA WLLDWVLRRS RDQLVDWL