| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0648 |
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| Symbol | |
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| ID | 4693021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 725114 |
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| End bp | 728536 |
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| Gene Length | 3423 bp |
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| Protein Length | 1140 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639848425 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_995449 |
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| Protein GI | 121607642 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.464664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.326348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGC CTGCGACCAT GCCCGCCCCG AGCGCGGCTT ACGAACACAA CGGCCAAAGC
GTCACGCGCG AGACCTTCTA CGCCATCGCC TGCGACCCGG CGCGCAGCGT GGCGGTGCAA
GCCTGCGCCG GCGCGGGCAA GACCTGGATG CTGGTCTCGC GCATGCTGCG CGCGCTGCTC
GACGGCTGCG CGCCGCACGA GATTTTGGCC ATCACCTTCA CCAAAAAAGC CGCCGGTGAA
ATGCGCCAGC GCCTGCAGGA ATGGCTGGAA GAATTCGCCC AGGCCCCGCC CGAGCGCCTG
AGCGCCGAAC TGGTGGCGCG CGGCATGCGC CCGGAGCGCG CGCTGGAGCA GCGCGCAGCG
CTGCAAAACC TGTACCGCCA ACTGCTCGAC AGCGGCCGCC CGGTGCAGAT CCGCACCTTC
CACAGTTGGT TTGCCGCGCT GCTGGGCATG GCGCCGCTGG CGCTCCTGCA AGCCCAGGGC
CTGCCCACGC AATTCCAATT GCTGGAAGAC GACGCCGAGG CCGTGCGCGC AGTCTGGAGC
CCGTTCCTGC ACACCGTTGC CGGCGACGCC GGCCTGCGCG CGGACTACAC AGCCGTGGTG
GCCCGGCATG GCCGCTCGCA AACCCACAAG GCGCTGGCTG CGGCGCTGAA CCGGCGCGTG
GAGTTCGACC TGGCCGACGC GGCCGGCGTG GTCCAGGCCT CGGTGCCGCC CTTTGCCGTG
CCATATCCCG AACTGGCCGA TGTGCCCGAC CCTGCCTGCG CGCTGCAAGC CGACGCCTGC
CGGCAGCGCT GGCTGGCCCG CGCAAAAGCC CTGGGGGCCG AGAGCAACAA GACCCCGCAA
AAGGCGGCCC AGGCGATCAT CGAGGCATTC GCCAGCACCG ACGCCAACCT GTGCCTCGAC
AGGCTGCGCC AGGCGCTGTT CGTGGCCACG GCAGACCGGC TGGCAAAAAA TCTGGAGAAA
TTCGCCGCCG CCCAAGAGGC CGCGCCCGAG CTGCGGCGCC TGCTCGACGC CCGCCGCCAG
CACGCCGCCT GGCAGCACCA GCAGAGCATG GCCAGGCTGA CGCGCTGCCT GTCGGCGCAA
TTCGCCGCCG TCAAAAACCA GCATGGCTGG GTGGACATGA ACGATGTCGA GCGCAGCGCG
CAGCGCATGC TGGCCGACCC GGTGCTCAGC GGCTGGGTGC AGCAGCGCCT GGATGCGCGC
ATCCGCCACC TACTGGTCGA CGAATTCCAG GACACCAACC CGCTGCAATG GCAGGCGCTG
CATGCCTGGC TGTCCGGCTA CGCGGGCGCG GGCGGCGGCG GCGCGGCGCC CAGCGTGTTC
ATCGTCGGCG ACCCCAAGCA AAGCATCTAC CGCTTCCGGC GCGCCGAGCC GCAGGTCTTC
ATGGCCGCGC AGACCTTCGT GCGCAACGGC CTGGGCGGCG ACCTGCTCAG TTGCGACCAC
ACCCGCCGCA ACGCCACGGG CGTGACAGCC GCAGTCAACC AGGTCATGGG CCAGGCCCAG
GCGCAGCAGG AGATCAGCGG CTTTCGCGCG CACAGCACCG AATCGCAAGA CCCGGGCGCG
GTGCTGCGCC TGCCGGCGAT ACTGCCGGCA CCGGCACGAG ATGGCGCCGA TGCCGACCCG
CTGGCCTGGC GCGACAGCCT GACCGAACCG CGCCACGAGC CCGAAGAAAC CCGGCGCATG
CGCGAATGCG CGCAGGCCGC CGCCTGGGTG GCCGCGCAGA TCGCCGCCGG CACGCCGCCC
GGGCAGGTGC TGGTGCTGGC GCGCAAGCGC GACCGGCTCA GCGCGATGCA AGACGCGCTG
CGCGCGCTGC ACCTGCCCTG CGTGCAGCCG GAAAAGGCCG ACCTGTTCGA CGCCCCCGAG
GTGCAAGACC TGGTGGCCCT GCTCGACGCC CTGGTCTCCA CCGGCCATGA CCTGTCACTG
GCCCGGGCGC TCAAGTCGCC GCTGTTCGGC CTCGGCGACG AGGCCCTGGC AGCATTGGCC
CGGCTGCGCC GCGAACCCGG GCATGCCGCC AGCAGTTGGT ACGAACTGCT CCAAAAAAGA
GAGCTTCTGA CCGGTGATTT GCTTGCGCCA GGCCCTGTGT TGGCCCAATA CAAAGCCTGG
GTGGACGCCT GGCCGCCGCA CGATGCGCTG CACGCCATCT ACCAACATGC CGACGTGCTG
GCCCGCTTTG CCGCTGCCGC GCCCGCAGCG CAGCGCCAGG CAGTGCAGGC CCAGTTGCGC
GCCCTGCTAT CGGCCGCGCT GCAATATGAC GGCGGCCGCT ACCTGACGCC CTACGCCTTT
GTCCGGGCGC TGAAAAAGGG CGGCCTGCGC GCGCCGGGCC GGGTCGATGC GCAAGCCATC
CGGCTGCTCA CCGTGCATGG CGCCAAAGGG CTGGAGGCGC ATTGCGTGCT GCTGCTCGAC
ACCGACACCC GCCCGCCCAA AGCCGAAACC ATGGGCGTGC TGCTCGACTG GCCCGGCGAA
CGGGTCGTGC CCGCGAGCTT TATCTTTCTG GCCAGCGAAA CCCATCCGCC ACCCAGTGCC
GAGGCCGCGC TGGCCGCCGA ACAGCAGGCG CGCCAGCGCG AAGAACTGAA CCTGCTCTAC
GTGGCGATGA CGCGCGCCCG GCACAGCCTG GCACTATCGT CGGTGCAGCC CGCCCATGAC
GCACCGGGCA GTTGGTGGCA GCGCCTGGAG CCGCTGGCAG CCCCGGTACA AATGCCGGCG
CCGGGCGAAC CCACCACCGC ATCGGCAGCT TCGACCTCTC CATCTTCTCC GTCCTCTCCG
ACCCCTCCGG CCGCCGGGGA CACGCACGAA CATTTCACCC TGGCCGAGCT ACCCCCGCCA
TCGGCCTACC TGTCCACCCC CCTGCCCGCG CATTTGCCCG ACCACCTGTC CACCCCCCTG
CGCCCGGCCC CCCAAGGCCA TGCGCCCGAG AACCATGGCA CCGACCCCGG CACCCCGGCA
ACACGCCTGG GCGAGGCCAT GCACCAACTG CTGGAGCAGG CCGGCGTCGC CGGCGCGCCG
CTGGCCGAAC TGCGCGCGCA GGGCTGGCCC GCCGCGCGGC TGGCGCGGCT GGCGCAGGAT
TTCGACATCA GCATGGACGC GGCCTGGCTG GCGGCGCAGA CCGCGCAGCG CATCCTGACA
GGCGCAGGCG CCTGGGCCTG GGATGCCACG GTGGTAGACC ATGCCAGCAA CGAAGCGCTG
CTGCGCGACC AAGGGCAAAG CCTGCGGCTC GATCGCCTGG TGCACTGCCG CCACCCCGCT
GAGCGCGCGG GCTGGTGGGT GCTCGACTAC AAAAGCGCCG CCGCGCCCGA GCGCCAACCG
GCGCTGCTGG CACAGTTGCA GCGATACCGC GCAGCAGTGC AGCGCCAAAC CCCGGGCGAG
CGCGTGCATG CGGCCTTCCT GAGCGGCGAT GGGCGCATGG TGCTGCTGCC CGATGGCGGC
TGA
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| Protein sequence | MTAPATMPAP SAAYEHNGQS VTRETFYAIA CDPARSVAVQ ACAGAGKTWM LVSRMLRALL
DGCAPHEILA ITFTKKAAGE MRQRLQEWLE EFAQAPPERL SAELVARGMR PERALEQRAA
LQNLYRQLLD SGRPVQIRTF HSWFAALLGM APLALLQAQG LPTQFQLLED DAEAVRAVWS
PFLHTVAGDA GLRADYTAVV ARHGRSQTHK ALAAALNRRV EFDLADAAGV VQASVPPFAV
PYPELADVPD PACALQADAC RQRWLARAKA LGAESNKTPQ KAAQAIIEAF ASTDANLCLD
RLRQALFVAT ADRLAKNLEK FAAAQEAAPE LRRLLDARRQ HAAWQHQQSM ARLTRCLSAQ
FAAVKNQHGW VDMNDVERSA QRMLADPVLS GWVQQRLDAR IRHLLVDEFQ DTNPLQWQAL
HAWLSGYAGA GGGGAAPSVF IVGDPKQSIY RFRRAEPQVF MAAQTFVRNG LGGDLLSCDH
TRRNATGVTA AVNQVMGQAQ AQQEISGFRA HSTESQDPGA VLRLPAILPA PARDGADADP
LAWRDSLTEP RHEPEETRRM RECAQAAAWV AAQIAAGTPP GQVLVLARKR DRLSAMQDAL
RALHLPCVQP EKADLFDAPE VQDLVALLDA LVSTGHDLSL ARALKSPLFG LGDEALAALA
RLRREPGHAA SSWYELLQKR ELLTGDLLAP GPVLAQYKAW VDAWPPHDAL HAIYQHADVL
ARFAAAAPAA QRQAVQAQLR ALLSAALQYD GGRYLTPYAF VRALKKGGLR APGRVDAQAI
RLLTVHGAKG LEAHCVLLLD TDTRPPKAET MGVLLDWPGE RVVPASFIFL ASETHPPPSA
EAALAAEQQA RQREELNLLY VAMTRARHSL ALSSVQPAHD APGSWWQRLE PLAAPVQMPA
PGEPTTASAA STSPSSPSSP TPPAAGDTHE HFTLAELPPP SAYLSTPLPA HLPDHLSTPL
RPAPQGHAPE NHGTDPGTPA TRLGEAMHQL LEQAGVAGAP LAELRAQGWP AARLARLAQD
FDISMDAAWL AAQTAQRILT GAGAWAWDAT VVDHASNEAL LRDQGQSLRL DRLVHCRHPA
ERAGWWVLDY KSAAAPERQP ALLAQLQRYR AAVQRQTPGE RVHAAFLSGD GRMVLLPDGG
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