| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0612 |
|---|
| Symbol | |
|---|
| ID | 4692158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 680766 |
|---|
| End bp | 682004 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639848389 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_995413 |
|---|
| Protein GI | 121607606 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTTC GCTTGAACAG ATTCGCGCTG TATGCGGCAG TTGCCGCAGC CTCGGTTGGC
CTATCGGTTG CTGCCCATGC GGCCGAGCCG ATCAAGATTG GCGTGGCCGG TCCTTTCACC
GGCGGATCTT CCTCGATGGG GGTGAGCATG CGCGATGGCG TGCGGCTGGC GATCGATGAA
ATCAACAAGG CCGGGGGCGT GCTGGGCCGC CCGCTGCAAG CCATCGAGCG TGACGACGAA
GCCAAGAACG AACGCGGTGT GCAGATCGCC CAGGAACTGA TCAACAAGGA AAAAGTCAGC
GCCGCCGTCG GCTATATCAA CACCGGCGTG GCACTGGCGG CGCAGCGCTT TTTCCAGGAT
GCCAGGATTC CGGTGATGAA CAATGTGGCC ACCGGTTCGG TCATCACGCA CCAGTTCGAT
GACCAGCCGG AAAACTACAT CTTCCGCAAT TCGGCGCATG ACAGCATACA GGCGCCGATG
ATCGTCGAGG AGGCCATCAC CCGCCGCGGC TTCAAGAAGG TGGCGATTTT GGCGGACTCG
ACCAACTACG GGCAATTGGG CCGCGCCGAT CTGGAAAAGG CGCTGGCGCT CAAGGGCATC
AAACCGGTGG CGATCGAGAA GTTCAACATC AAGGATGTGG ACATGACGGC GCAACTGCTC
AAGGCCAAGG AAGCCGGCGC CGAGGCCGTG CTGACCTACG GCATCGGGCC TGAACTGGCG
CAGATTGCCA ACGGCATGAC CAAACTGGGC TGGAAGGTGC CGATGGTGGG CAGTTGGACC
CTGTCGATGG CCAACTACAT CGACAACGCC GGCCCCGGTG GCGAAGGCGC GCGCATGCCG
CAGACCTTCA TCCAGGAGCC GACCACGCCC AAGCGCCAGT CCTTCATCAT CAATTACCTG
AAGACTTTCA ACCCGAAGAA TGCGCGCATC GACTCGCCGG TATCGGCTGC GCAGGGCTAT
GACTCGATCT ACCTGCTGGC GGCCGCCATC CGGCAGGCCG GCTCCACCGA TGGCCCCAAG
ATCCGGGCGG CGCTGGAAGA TCTGAAGACC CCGGTCGATG GGGTGGTGAC CACCTACACC
CGGCCGTTCA CGGCCAAGGA CCATGAGGCC ATTACCGCCA ACATTCCGGT GATCGGCGAA
GTCAAGGGCC AGCGCGTGGT CTACGCCTAT GCGCAGGATT TGCAGAAAGC CTCCGAAGTG
CGCGTCAAGA GCGCCGTGGC CGAGCTGCCC AAGAAGTAA
|
|---|
| Protein sequence | MPFRLNRFAL YAAVAAASVG LSVAAHAAEP IKIGVAGPFT GGSSSMGVSM RDGVRLAIDE
INKAGGVLGR PLQAIERDDE AKNERGVQIA QELINKEKVS AAVGYINTGV ALAAQRFFQD
ARIPVMNNVA TGSVITHQFD DQPENYIFRN SAHDSIQAPM IVEEAITRRG FKKVAILADS
TNYGQLGRAD LEKALALKGI KPVAIEKFNI KDVDMTAQLL KAKEAGAEAV LTYGIGPELA
QIANGMTKLG WKVPMVGSWT LSMANYIDNA GPGGEGARMP QTFIQEPTTP KRQSFIINYL
KTFNPKNARI DSPVSAAQGY DSIYLLAAAI RQAGSTDGPK IRAALEDLKT PVDGVVTTYT
RPFTAKDHEA ITANIPVIGE VKGQRVVYAY AQDLQKASEV RVKSAVAELP KK
|
|---|
| |