Gene Veis_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0606 
Symbol 
ID4691734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp674437 
End bp675054 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content61% 
IMG OID639848383 
Productmembrane lipoprotein lipid attachment site 
Protein accessionYP_995407 
Protein GI121607600 
COG category[R] General function prediction only 
COG ID[COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) 
TIGRFAM ID[TIGR02722] uncharacterized proteobacterial lipoprotein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.624185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.467937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAC GACACACCCT CCGGCGCAGC GCGCTGATCC TGGCCCTTGC GGCCGGCACC 
CTGGCCCTGT CGGCCTGCCA GGGACTGTCC TCGCCTACGG TGAGATTCGA TCGCGAGGTC
AACTACGGCG ACGCCAAGGC GGTCGAGTTG GTCACCAACG AGTTCGGCTC CACCGACCTG
CAGATGATTG CCGAGAAGAT GACCGGCGGG CTGCTCGAAA CCGGCATCTT CCAGGGCCGC
CCCACGGTGA CGATCTCCAC CGTGAAGAAC AAGACCAGCG AATACATAGA CACCACCAAC
GTGATGAACT CGATACAGAC CGCGCTGGTC AAGTCGGGCA AGGTGCGCTT CGCGCGCTCG
ATCAACGAGA TGCAGCAGGG CGTCGACGAG TTGCAGCGCC AGAACCAGAG CGGCCTGTAC
CGGCAGGGCA GCACCGCCAA AATGGGCCAG ATGACGGCGG CCAAATACAG CATGGAGGGC
GAGTTGACCA GCATCGTCAA GCAAAGCAGC GCGACCAAGG ACGTGTACTA CAAGTTCACG
CTCAAGCTGT TCGATGTGCA GGAAGGCACG ATCGAATGGC AGGACGAGAA AGAAATCCGC
AAAACCAGCA AGCGCTGA
 
Protein sequence
MQQRHTLRRS ALILALAAGT LALSACQGLS SPTVRFDREV NYGDAKAVEL VTNEFGSTDL 
QMIAEKMTGG LLETGIFQGR PTVTISTVKN KTSEYIDTTN VMNSIQTALV KSGKVRFARS
INEMQQGVDE LQRQNQSGLY RQGSTAKMGQ MTAAKYSMEG ELTSIVKQSS ATKDVYYKFT
LKLFDVQEGT IEWQDEKEIR KTSKR