Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0606 |
Symbol | |
ID | 4691734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 674437 |
End bp | 675054 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639848383 |
Product | membrane lipoprotein lipid attachment site |
Protein accession | YP_995407 |
Protein GI | 121607600 |
COG category | [R] General function prediction only |
COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.624185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.467937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAAC GACACACCCT CCGGCGCAGC GCGCTGATCC TGGCCCTTGC GGCCGGCACC CTGGCCCTGT CGGCCTGCCA GGGACTGTCC TCGCCTACGG TGAGATTCGA TCGCGAGGTC AACTACGGCG ACGCCAAGGC GGTCGAGTTG GTCACCAACG AGTTCGGCTC CACCGACCTG CAGATGATTG CCGAGAAGAT GACCGGCGGG CTGCTCGAAA CCGGCATCTT CCAGGGCCGC CCCACGGTGA CGATCTCCAC CGTGAAGAAC AAGACCAGCG AATACATAGA CACCACCAAC GTGATGAACT CGATACAGAC CGCGCTGGTC AAGTCGGGCA AGGTGCGCTT CGCGCGCTCG ATCAACGAGA TGCAGCAGGG CGTCGACGAG TTGCAGCGCC AGAACCAGAG CGGCCTGTAC CGGCAGGGCA GCACCGCCAA AATGGGCCAG ATGACGGCGG CCAAATACAG CATGGAGGGC GAGTTGACCA GCATCGTCAA GCAAAGCAGC GCGACCAAGG ACGTGTACTA CAAGTTCACG CTCAAGCTGT TCGATGTGCA GGAAGGCACG ATCGAATGGC AGGACGAGAA AGAAATCCGC AAAACCAGCA AGCGCTGA
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Protein sequence | MQQRHTLRRS ALILALAAGT LALSACQGLS SPTVRFDREV NYGDAKAVEL VTNEFGSTDL QMIAEKMTGG LLETGIFQGR PTVTISTVKN KTSEYIDTTN VMNSIQTALV KSGKVRFARS INEMQQGVDE LQRQNQSGLY RQGSTAKMGQ MTAAKYSMEG ELTSIVKQSS ATKDVYYKFT LKLFDVQEGT IEWQDEKEIR KTSKR
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