| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0518 |
|---|
| Symbol | |
|---|
| ID | 4692826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 584143 |
|---|
| End bp | 585804 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639848296 |
|---|
| Product | major facilitator superfamily transporter |
|---|
| Protein accession | YP_995320 |
|---|
| Protein GI | 121607513 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.330299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCG CTCATCCCGC ACCACGGCCG ATGACGCCTG AAGAGAAGAA AGTCATCTTC
GCTTCATCGC TCGGCACCGT TTTCGAGTGG TACGACTTTT ATCTGTACGG CGCGCTCGCA
AGCATCATCG CCAAGCAGTT CTTCAGCGGC CTGGATGCCG GCTCGGCCTT CATCTTCGCG
CTGCTGGCGT TTGCTGCCGG CTTCATCGTG CGGCCGTTCG GCGCCATCTT CTTTGGCCGC
CTGGGCGACA TGATCGGCCG CAAGTACACC TTCCTGATCA CCATCCTGAT CATGGGCCTG
TCGACCTTCC TCGTCGGTAT CTTGCCCTCC TATGCAACGG TCGGCGTCGC GGCGCCAGTG
ATCCTGATTG CGCTGCGTCT GCTGCAAGGC CTGGCGCTGG GCGGCGAGTA CGGCGGCGCA
GCCACCTATG TGGCCGAGCA TTCTCCCCAT GGCAAACGCG GCGCCTACAC GTCCTGGATT
CAGACCACGG CCACGCTGGG ACTGTTTTTG TCGCTGGCGG TGATTCTTGG CGTGCGCACC
ACCTTGGGCG AAGAAGCTTT CGCCAGTTGG GGCTGGCGCC TGCCGTTCCT GCTGTCCATC
GTGCTGCTCG GCATCTCGGT GTGGATTCGT CTGTCGATGA GCGAATCACC GGCCTTCCAG
AAGATGAAGG CCGAAGGCAA GACCTCCAAG GCACCGCTGA CCGAATCCTT CGCCCGCTGG
AAGAACCTGA AGATCGTGAT CCTGGCCCTG CTGGGCCTGA CCGCCGGCCA GGCCGCCGTC
TGGTACTCGG GCCAGTTCTA TGCGCTGCTC TTCCTGACCG AGACGCTCAA GGTCGACGGC
GCGACCGCCA ACATCCTGGT GGCCGTGGCG CTGATGATCG GCACGCCGTT CTTTGTCGTG
TTCGGCACCC TGTCGGACCG CATCGGCCGC AAACCCATCA TCCTGACGGG CTGCCTGCTG
GCTGCGCTGA CCTACTTCCC GGTGTTCGGC GCGCTGACCA AGGCCGCCAA CCCGGCGCTG
GCCGAGGCCC AGGCGAAGAA CCAGGTGCTG GTGATGGCCG ACGCCAGCGA ATGCTCGTTC
CAGTTCAACC CCACGGGGCA GGTCAAATTC ACCAGTTCCT GCGACATCGC CAAGCAGGTG
CTGGCCCGGG CCTCGGTGAG CTACGAAAAC GTCCCGGCCG CAGCCGGCAC CCCGGCCACG
ATCAAGATCG GAGAGACCGC GATCACCTCG TACTCCAGCA AAGGCCTGCC GGCTGACGAG
GCCAAGAAAA AGGACGCCGA GTTCAAACAA GCGGTCGGAG ACGCGCTGAA GGCAGCCGGT
TATCCCGCCA AGGCCGACCC GGAACGCATC GACAAGGTAA TGATCATCGC AATCATCACC
TACCTGGTGC TGCTGGTGAC CATGGTGTAC GGCCCGATCG CCGCGATACT GGTGGAGATG
TTCCCCACCC GCATCCGCTA CACCTCGATG TCGCTGCCCT ACCACATCGG CAACGGCTGG
TTCGGCGGCC TGCTGCCCAC CTCGGCATTT GCCATCGTGG CCCAGACCGG CAACATGTAC
AACGGCCTGT GGTTCCCCGT CGTCATCGCC GGCGCCACCG TCGTGATCGG GGGCCTGTTC
ATCAAGGACA CCAAGGACGT CGACATCTAC GCCAACGACT GA
|
|---|
| Protein sequence | MATAHPAPRP MTPEEKKVIF ASSLGTVFEW YDFYLYGALA SIIAKQFFSG LDAGSAFIFA
LLAFAAGFIV RPFGAIFFGR LGDMIGRKYT FLITILIMGL STFLVGILPS YATVGVAAPV
ILIALRLLQG LALGGEYGGA ATYVAEHSPH GKRGAYTSWI QTTATLGLFL SLAVILGVRT
TLGEEAFASW GWRLPFLLSI VLLGISVWIR LSMSESPAFQ KMKAEGKTSK APLTESFARW
KNLKIVILAL LGLTAGQAAV WYSGQFYALL FLTETLKVDG ATANILVAVA LMIGTPFFVV
FGTLSDRIGR KPIILTGCLL AALTYFPVFG ALTKAANPAL AEAQAKNQVL VMADASECSF
QFNPTGQVKF TSSCDIAKQV LARASVSYEN VPAAAGTPAT IKIGETAITS YSSKGLPADE
AKKKDAEFKQ AVGDALKAAG YPAKADPERI DKVMIIAIIT YLVLLVTMVY GPIAAILVEM
FPTRIRYTSM SLPYHIGNGW FGGLLPTSAF AIVAQTGNMY NGLWFPVVIA GATVVIGGLF
IKDTKDVDIY AND
|
|---|
| |