Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0422 |
Symbol | |
ID | 4693661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 478725 |
End bp | 480308 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639848203 |
Product | extracellular solute-binding protein |
Protein accession | YP_995228 |
Protein GI | 121607421 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.147362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.173861 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTT CAAACCTGCG CCTCGTGCTT GGGGTGATGC TGGCCATTGG TGTCCACACG GCCCTGCCTG CCAAAACATT GACATGGACG GCGGGGCTGG ATGCGCTGTC GATGGACCCG CATTCGTCGA CCAACTCATT TACCAACGCA TTCGTGACCA ATGTGTATGA GTCCCTGGTG CGCTTCAACG ACAAATTGCA GATCGAGCCG GCGCTGGCCG AGTCCTGGAA AATGCGCAAT CCCGTGGTCT GGCGCTTCCA TTTGCGGCGC GGGGTGAAGT TTCACAACGG CGAAGCGTTT GATGCCGATG ATGTGGTGTT TACCTGGTCC CGTGCGAGTT CGCCCGGCTC GCTGGTGCGG ATCAACCTGA GCGATATCAA GGAAGTGCGC AAGGTGGATC AATACACGGT CGATATCGAA ACCCATGCCC CATTTCCGAC CCTGTTGAAC GAGTTGGTGC AATTTCTGGT GATGAGCAAG TCTTGGTCGG AGGCGAACAA TGCGACCGAG GCCAGCGATC TCATGCAGAA AAAAGAGAAC TACGCCAACC GCCATACCAA TGGCACCGGC CCCTTCATCG TGAAATCACG CGAAATCGAT GTCAGGACGG AGTTTCTTGC CAATCCGCAC TGGTGGGACA AAAAGCCGCG GCACAATCTG AGCAACGTCG TATTTACGCC GATCAAGTCG GATGCCACGC GCACTTCGTC CTTGTTGTCG GGCGTGGTGG ATGTGTCGGT CAGCGTGCCG GTGCAAGATG TCCAGCGTTT GCAGCAGGGG GCGGCCATCG ATGTCGTTCA GGGGCCTGAA CTGCGCACCA TCTTCCTGGG CATGGACCAG TTCCGCGATG AATTGCTGTA TGGCAATGTC AAGGGCAAGA ACCCGTTCAA GGATTTGCGC GTCAGGCAGG CGCTGTATCA GGCCATCGAT GTCGAGGTGC TCAAGCGGGC GGTGATGCGC GGCGCTTCCT GGCCGGCGGG CAGTTTGATT TCTCCGTTCC TGAACGGTGC GCCGGCGAGC TTGAACCAGC GCGCCTTTGC CTACGATACG GCGGCGGCGA AAAAACTGCT GGCCGATGCC GGCTATCCCA ATGGTTTTTC CGTCGGCTTG CAGTGCCCGA ACAATCGTTA TGTCTATGAC GAGCAACTCT GCCTTGCCAT CACGGCCATG CTCGCGCGCG TCGGCATCAA GGCCAACCCC ATGATAGAGC CGGCTGCAAA ATGGAACCAG CGCCTGAACA CCAACGATGT GTCGCTGTAC ATGATGGGGC ATGCCGGTTT GCCGATGGCC GATACCTACG CGATTCTCAA GGATGTGGTG GGCACACAGA CGGCAAACAT TGGCGGCCTC AATTCAGGCC GGTATTCCAA CCCGAGATTT GACGCCTACC TGCCCAAAAT CGCCAGTGAA CTCGACCTTG CCAAACGCAA TCAACTGATC ACCGCGGCGG TGGCGATAGA GCGCAACGAT ATTTCACATA TTCCGCTGCA TCAGCAGCCG GTGATCTGGG CGGCGAAGAA GGGGATCGAC TTGCGCCAGT CGCCGGATAA TCAGCTGCGC CTGTGGCTGA TCACCGTCAA ATGA
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Protein sequence | MKISNLRLVL GVMLAIGVHT ALPAKTLTWT AGLDALSMDP HSSTNSFTNA FVTNVYESLV RFNDKLQIEP ALAESWKMRN PVVWRFHLRR GVKFHNGEAF DADDVVFTWS RASSPGSLVR INLSDIKEVR KVDQYTVDIE THAPFPTLLN ELVQFLVMSK SWSEANNATE ASDLMQKKEN YANRHTNGTG PFIVKSREID VRTEFLANPH WWDKKPRHNL SNVVFTPIKS DATRTSSLLS GVVDVSVSVP VQDVQRLQQG AAIDVVQGPE LRTIFLGMDQ FRDELLYGNV KGKNPFKDLR VRQALYQAID VEVLKRAVMR GASWPAGSLI SPFLNGAPAS LNQRAFAYDT AAAKKLLADA GYPNGFSVGL QCPNNRYVYD EQLCLAITAM LARVGIKANP MIEPAAKWNQ RLNTNDVSLY MMGHAGLPMA DTYAILKDVV GTQTANIGGL NSGRYSNPRF DAYLPKIASE LDLAKRNQLI TAAVAIERND ISHIPLHQQP VIWAAKKGID LRQSPDNQLR LWLITVK
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