Gene Veis_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0422 
Symbol 
ID4693661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp478725 
End bp480308 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content58% 
IMG OID639848203 
Productextracellular solute-binding protein 
Protein accessionYP_995228 
Protein GI121607421 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.147362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.173861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT CAAACCTGCG CCTCGTGCTT GGGGTGATGC TGGCCATTGG TGTCCACACG 
GCCCTGCCTG CCAAAACATT GACATGGACG GCGGGGCTGG ATGCGCTGTC GATGGACCCG
CATTCGTCGA CCAACTCATT TACCAACGCA TTCGTGACCA ATGTGTATGA GTCCCTGGTG
CGCTTCAACG ACAAATTGCA GATCGAGCCG GCGCTGGCCG AGTCCTGGAA AATGCGCAAT
CCCGTGGTCT GGCGCTTCCA TTTGCGGCGC GGGGTGAAGT TTCACAACGG CGAAGCGTTT
GATGCCGATG ATGTGGTGTT TACCTGGTCC CGTGCGAGTT CGCCCGGCTC GCTGGTGCGG
ATCAACCTGA GCGATATCAA GGAAGTGCGC AAGGTGGATC AATACACGGT CGATATCGAA
ACCCATGCCC CATTTCCGAC CCTGTTGAAC GAGTTGGTGC AATTTCTGGT GATGAGCAAG
TCTTGGTCGG AGGCGAACAA TGCGACCGAG GCCAGCGATC TCATGCAGAA AAAAGAGAAC
TACGCCAACC GCCATACCAA TGGCACCGGC CCCTTCATCG TGAAATCACG CGAAATCGAT
GTCAGGACGG AGTTTCTTGC CAATCCGCAC TGGTGGGACA AAAAGCCGCG GCACAATCTG
AGCAACGTCG TATTTACGCC GATCAAGTCG GATGCCACGC GCACTTCGTC CTTGTTGTCG
GGCGTGGTGG ATGTGTCGGT CAGCGTGCCG GTGCAAGATG TCCAGCGTTT GCAGCAGGGG
GCGGCCATCG ATGTCGTTCA GGGGCCTGAA CTGCGCACCA TCTTCCTGGG CATGGACCAG
TTCCGCGATG AATTGCTGTA TGGCAATGTC AAGGGCAAGA ACCCGTTCAA GGATTTGCGC
GTCAGGCAGG CGCTGTATCA GGCCATCGAT GTCGAGGTGC TCAAGCGGGC GGTGATGCGC
GGCGCTTCCT GGCCGGCGGG CAGTTTGATT TCTCCGTTCC TGAACGGTGC GCCGGCGAGC
TTGAACCAGC GCGCCTTTGC CTACGATACG GCGGCGGCGA AAAAACTGCT GGCCGATGCC
GGCTATCCCA ATGGTTTTTC CGTCGGCTTG CAGTGCCCGA ACAATCGTTA TGTCTATGAC
GAGCAACTCT GCCTTGCCAT CACGGCCATG CTCGCGCGCG TCGGCATCAA GGCCAACCCC
ATGATAGAGC CGGCTGCAAA ATGGAACCAG CGCCTGAACA CCAACGATGT GTCGCTGTAC
ATGATGGGGC ATGCCGGTTT GCCGATGGCC GATACCTACG CGATTCTCAA GGATGTGGTG
GGCACACAGA CGGCAAACAT TGGCGGCCTC AATTCAGGCC GGTATTCCAA CCCGAGATTT
GACGCCTACC TGCCCAAAAT CGCCAGTGAA CTCGACCTTG CCAAACGCAA TCAACTGATC
ACCGCGGCGG TGGCGATAGA GCGCAACGAT ATTTCACATA TTCCGCTGCA TCAGCAGCCG
GTGATCTGGG CGGCGAAGAA GGGGATCGAC TTGCGCCAGT CGCCGGATAA TCAGCTGCGC
CTGTGGCTGA TCACCGTCAA ATGA
 
Protein sequence
MKISNLRLVL GVMLAIGVHT ALPAKTLTWT AGLDALSMDP HSSTNSFTNA FVTNVYESLV 
RFNDKLQIEP ALAESWKMRN PVVWRFHLRR GVKFHNGEAF DADDVVFTWS RASSPGSLVR
INLSDIKEVR KVDQYTVDIE THAPFPTLLN ELVQFLVMSK SWSEANNATE ASDLMQKKEN
YANRHTNGTG PFIVKSREID VRTEFLANPH WWDKKPRHNL SNVVFTPIKS DATRTSSLLS
GVVDVSVSVP VQDVQRLQQG AAIDVVQGPE LRTIFLGMDQ FRDELLYGNV KGKNPFKDLR
VRQALYQAID VEVLKRAVMR GASWPAGSLI SPFLNGAPAS LNQRAFAYDT AAAKKLLADA
GYPNGFSVGL QCPNNRYVYD EQLCLAITAM LARVGIKANP MIEPAAKWNQ RLNTNDVSLY
MMGHAGLPMA DTYAILKDVV GTQTANIGGL NSGRYSNPRF DAYLPKIASE LDLAKRNQLI
TAAVAIERND ISHIPLHQQP VIWAAKKGID LRQSPDNQLR LWLITVK