Gene Veis_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0318 
Symbol 
ID4694744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp362532 
End bp363395 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content63% 
IMG OID639848101 
Productregulatory proteins, IclR 
Protein accessionYP_995126 
Protein GI121607319 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.83044e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTT TCCATTGGTC AAGCATCAAA AATCAGAGGC ATGGCGTAGC ATCGGACAGG 
CGGGCACAGG CGCCGCGACA CATGAAGGAG CAGTTTTTGG GTTCGGATAA CTTGTTCGTG
CAATCGCTTG CCAAAGGCAT TGGATTGCTG GAAGCCCTGG GAGCGCGCCC CGGTGCCCTG
AGCCTGACCG ACTTGGCCGA CCTGACGGGA ATGGATCGCA GCACGACGCA GCGCATGACG
CATACGCTGG TGCAGTTGGG CTATATCGAG AAGGGCGCCA ACGGCCGCGG CTTCGTGCCG
GGCCGCAAGA TCCTCGATCG CACCTTCGAC TACCTCAGCC ACAACCTGCT GATCGAACGG
GCGAGCCCGA TCCTGACAGA CCTGCAGCGC GAGGCCGGCG AGCGCGTGGA CCTGAGCCTG
TTCGACGACC TGTCCATCAT TTACGCTTGG CGGCGCCAGA CGAAGCGGCA GACCTTCTTT
GCCACGCTGG TGGGACGCCG GATCCCGTGC TATTGCTCGT CAGGGGGAAG GGCGATCATG
TCGCACCTGC CGCAGCAGCG CGTCGACGAC ATCCTTGCGC GTTCGACGCT GCGACCGATC
ACGCCCAAGA CCGAAACCGA TGTGGCGGTC ATCAAGCGCC GTATCGCACA GGCGCGGGAG
TCGAATTACG CGCTGGCCCT GGAGGAAACA CTGCTGGGCG AAATCGCGGT GGGCTGCGCG
ATCCTCGACC ATGACCGGCA GCCGATGGCC GCGCTGCACA TCGCCGGATC GCTGTCAGAG
TGGACTGTGG AGGCCTTCGT CCAGCGCTTC ACGCCGTTGG CCATCGAAGC GGCGCGTGCG
CTCGGAGGCG GCATACCGCG TTAA
 
Protein sequence
MSFFHWSSIK NQRHGVASDR RAQAPRHMKE QFLGSDNLFV QSLAKGIGLL EALGARPGAL 
SLTDLADLTG MDRSTTQRMT HTLVQLGYIE KGANGRGFVP GRKILDRTFD YLSHNLLIER
ASPILTDLQR EAGERVDLSL FDDLSIIYAW RRQTKRQTFF ATLVGRRIPC YCSSGGRAIM
SHLPQQRVDD ILARSTLRPI TPKTETDVAV IKRRIAQARE SNYALALEET LLGEIAVGCA
ILDHDRQPMA ALHIAGSLSE WTVEAFVQRF TPLAIEAARA LGGGIPR