| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0303 |
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| Symbol | |
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| ID | 4691936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 341513 |
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| End bp | 343210 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639848087 |
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| Product | threonine dehydratase |
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| Protein accession | YP_995112 |
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| Protein GI | 121607305 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0613066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.380423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGC ACCTGACCCC CGACGACTAT CTGAAGAAGA TCCTCACCGC CCGTGTCTAC
GACGTGGCGC TGGAATCGGC GCTGGAGCCG GCCCACAACC TGAGCCGCCG GCTGCACAAC
AGGGTGCTGT TCAAGCGCGA AGACCAGCAA CCGGTGTTCA GCTTCAAACT GCGCGGCGCG
TACAACAAAA TGGCGCAACT CGCGCCCGAG CAGTTGCAGC GCGGGGTGAT CTGCGCCTCG
GCCGGCAACC ACGCCCAGGG CGTGGCGATG AGCGCGCGCA AACTGGGCGC GCGCGCGCTC
GTCGTGATGC CGACGACCAC GCCCCAGCTC AAGATCGACG CCGTGAAGAT GCTCGGCGGC
GAGGTCGTGC TCTCCGGGGA CAGCTATTCC GACGCCTACG GGCACTCGCT GCAACTGGAG
CAGGAACTGG GCCTGACCTT CATCCACCCC TTTGACGACC CGGACGTGAT CGCCGGCCAA
GGCACCATCG CGATGGAACT CCTGCGCCAG TTGCAAAGCC TGGGCAGCGA CCGGCTCGAC
GCCGTGTTCG TGGCCATCGG CGGCGGCGGG CTGATCAGCG GCGTGGCCAA CTGCATCAAG
GCCCTGCGGC CCGAGATCAA GATCATCGGC GTGCAGATGA ACGACTCGGA CGCGATGATC
CAATCGGTCA AGGCGCAGCA GCGCGTCACG CTGGCCGATG TGGGGCTGTT TTCCGACGGC
ACGGCCGTCA AGTGCGTGGG CCGGGAGAAC TTGCGCATCG CGCAGGGCCT GGTCGATGGC
TTCATCAGCG TCGACACCGA CGCCGTCTGC GCGGCCATCA AGGACGTGTT TCTCGACACG
CGCAGCATCG TCGAGCCAGC CGGCGCGCTG GCCGTGGCCG CGATCAAGCA ATATGTCGCC
ACGCACCAGA CCCGGGGCGA GACCTACGCC GCCATCCTCA GCGGCGCCAA CATGAACTTC
GACCGCCTGC GCTTCGTCGC CGAGCGGGCC GAGGTGGGCG AGGAGCGCGA GGCCCTGCTG
GCCGTCACCA TCCCCGAAGA TCGCGGCAGC TTCCGGCGCT TTTGCGAACT GGTCGGCGGC
CTGCCCGGCG GCCCGCGCAA CGTGACCGAA TTCAACTACC GCATCAGCGA CGCCCAACTG
GCCCATGTGT TCGTGGGCCT GACCACGCAG GGCCGGGGCG AGTCGGAAGA AATCGCCCGC
AACTTCAGCC AGCACGGTTT CGAGACGCTG GACCTGACCC ACGACGAACT GGCCAAGGAA
CACCTGCGCC ACCTGGTGGG TGGGCATTCG GCATTGGCGC AGGACGAGCG GCTGCTGCGC
TTTACCTTCC CCGAACGTCC CGGCGCATTG CTCAAATTCC TGAGCCTGAT GCAGCCGACC
TGGAACATCA GCCTGTTCCA CTACCGCAAC CAGGGCGCAG ACTACGGCCG CACCCTCGTG
GGCATGCAGG TGCCCAGCGA AGACAGCGCC ACCTTCGACG CCTTTCTGGT CACCTTGGGC
TACCCCTGGG TGGAAGAAAC GCACAACCCG GCCTACCGGC TGTTCCTGTG CCCCAAACGA
GGGCCGGCAC GAGGGCAGGC CATCGTCGTC GATGAGCCAA TGATCGAATG GCCCGATGGT
CCGATCGGCC CGGATGGCCC GGAGCACGGG GCGCATGATC CGTTGGTGCC TGCCGCCGCC
GGAAAAAGAT CTGCATGA
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| Protein sequence | MTAHLTPDDY LKKILTARVY DVALESALEP AHNLSRRLHN RVLFKREDQQ PVFSFKLRGA
YNKMAQLAPE QLQRGVICAS AGNHAQGVAM SARKLGARAL VVMPTTTPQL KIDAVKMLGG
EVVLSGDSYS DAYGHSLQLE QELGLTFIHP FDDPDVIAGQ GTIAMELLRQ LQSLGSDRLD
AVFVAIGGGG LISGVANCIK ALRPEIKIIG VQMNDSDAMI QSVKAQQRVT LADVGLFSDG
TAVKCVGREN LRIAQGLVDG FISVDTDAVC AAIKDVFLDT RSIVEPAGAL AVAAIKQYVA
THQTRGETYA AILSGANMNF DRLRFVAERA EVGEEREALL AVTIPEDRGS FRRFCELVGG
LPGGPRNVTE FNYRISDAQL AHVFVGLTTQ GRGESEEIAR NFSQHGFETL DLTHDELAKE
HLRHLVGGHS ALAQDERLLR FTFPERPGAL LKFLSLMQPT WNISLFHYRN QGADYGRTLV
GMQVPSEDSA TFDAFLVTLG YPWVEETHNP AYRLFLCPKR GPARGQAIVV DEPMIEWPDG
PIGPDGPEHG AHDPLVPAAA GKRSA
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