Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0274 |
Symbol | |
ID | 4690588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 303808 |
End bp | 305037 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639848058 |
Product | succinyldiaminopimelate transaminase |
Protein accession | YP_995083 |
Protein GI | 121607276 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCCT TGCTTTCCCG CCTGCAGCCC TACCCTTTCG AGCGGCTGCG ACAGCTCTTT GCGGGGGTGA CCCCGGCTGC GGCTTACAGT CCCATCAGCC TGGGCATGGG CGAGCCGCGC CATCCGGCGC CGCAGTTGGT CAAGGACGCA TTGATCGGGC ATCTGGCGGG CCTGGGCCAT TACCCGGCCA CCGCCGGCGA GCCGCAACTG CGCGCGGCCT GCGCCGCCTG GCTCCAGCGG CGCTACGGAC TGGCGCTGGA CCCGGGCAGC CAGTTGCTCC CGGTGAACGG CTCGCGCGAA GCATTGTTCG CGTTCGCCCA GACCGTCATC GACCCCTCGC AAGGCCCGCC GTTCGTGGTC TGCCCGAACC CGTTCTATCA AATCTACGAA GGCGCTGCGC TGTTGGCCGG GGCCAGACCG TACTACGCCT GCAGCGACCC GGCGCGCAAC TTCGCCGTGG ACTGGGACGC AGTGCCCGCC AACGTTTGGC AGCGCACGCA ACTGCTGTTT CTGTGCTCGC CGGGCAACCC TACCGGCGCC GTGATGCCGC TGGCCGAATG GCAAAAGCTG TTGGCACTGA GCGAGCGCCA TGGTTTCGTC ATCGCCTCGG ACGAGTGCTA CAGCGAAATT TATGCCCATG ACCCGCCCCC GCTGGGCGGC CTGCAGGCGG CCGCCGCGTC GGGCCGGGGC GACTTCAAGA ACCTGATTGC TTTCACCAGC CTGTCCAAGC GCAGCAACGT GCCCGGCCTG CGCAGCGGCT TCGTGGCCGG CGACGCGGCG CTGATCAAGT CCTTTTTGCT CTACCGCACC TACCACGGCA GCGCCATGGG CCCGAGCGTG CAGGCGGCCA GCATCGCAGC CTGGGGGGAC GAGCAGCATG TGCAGGAAAA CCGCGCGCGC TACCGCGAGA AGTTCGCCCG GGTCACCCCG CTGCTGGCCC GGGTGATGCA GGTCGCATTG CCCGACGCCG GCTTTTACCT GTGGGCCCGG GTGCCCGACG CATTCGGCCT GGACGACACC GGGTTCGCAC AAGCCCTGCT GGCCCAATAC AATGTCACAG TACTGCCGGG CAGTTATCTG GCCCGGGCAG TCCAGGGCCA CAACCCCGGC GCCGGGCGCG TGCGCATGGC CTTGGTGGCC GAAACCGAAG AATGCATGCA GGCTGCGGAG CGCATCGTGC AGTTCGCCCG ATCCCATGCG GACCGACCCC CATCATCGAT ATCGACATGA
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Protein sequence | MNPLLSRLQP YPFERLRQLF AGVTPAAAYS PISLGMGEPR HPAPQLVKDA LIGHLAGLGH YPATAGEPQL RAACAAWLQR RYGLALDPGS QLLPVNGSRE ALFAFAQTVI DPSQGPPFVV CPNPFYQIYE GAALLAGARP YYACSDPARN FAVDWDAVPA NVWQRTQLLF LCSPGNPTGA VMPLAEWQKL LALSERHGFV IASDECYSEI YAHDPPPLGG LQAAAASGRG DFKNLIAFTS LSKRSNVPGL RSGFVAGDAA LIKSFLLYRT YHGSAMGPSV QAASIAAWGD EQHVQENRAR YREKFARVTP LLARVMQVAL PDAGFYLWAR VPDAFGLDDT GFAQALLAQY NVTVLPGSYL ARAVQGHNPG AGRVRMALVA ETEECMQAAE RIVQFARSHA DRPPSSIST
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