Gene Veis_0274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0274 
Symbol 
ID4690588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp303808 
End bp305037 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content68% 
IMG OID639848058 
Productsuccinyldiaminopimelate transaminase 
Protein accessionYP_995083 
Protein GI121607276 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID[TIGR03538] succinyldiaminopimelate transaminase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCT TGCTTTCCCG CCTGCAGCCC TACCCTTTCG AGCGGCTGCG ACAGCTCTTT 
GCGGGGGTGA CCCCGGCTGC GGCTTACAGT CCCATCAGCC TGGGCATGGG CGAGCCGCGC
CATCCGGCGC CGCAGTTGGT CAAGGACGCA TTGATCGGGC ATCTGGCGGG CCTGGGCCAT
TACCCGGCCA CCGCCGGCGA GCCGCAACTG CGCGCGGCCT GCGCCGCCTG GCTCCAGCGG
CGCTACGGAC TGGCGCTGGA CCCGGGCAGC CAGTTGCTCC CGGTGAACGG CTCGCGCGAA
GCATTGTTCG CGTTCGCCCA GACCGTCATC GACCCCTCGC AAGGCCCGCC GTTCGTGGTC
TGCCCGAACC CGTTCTATCA AATCTACGAA GGCGCTGCGC TGTTGGCCGG GGCCAGACCG
TACTACGCCT GCAGCGACCC GGCGCGCAAC TTCGCCGTGG ACTGGGACGC AGTGCCCGCC
AACGTTTGGC AGCGCACGCA ACTGCTGTTT CTGTGCTCGC CGGGCAACCC TACCGGCGCC
GTGATGCCGC TGGCCGAATG GCAAAAGCTG TTGGCACTGA GCGAGCGCCA TGGTTTCGTC
ATCGCCTCGG ACGAGTGCTA CAGCGAAATT TATGCCCATG ACCCGCCCCC GCTGGGCGGC
CTGCAGGCGG CCGCCGCGTC GGGCCGGGGC GACTTCAAGA ACCTGATTGC TTTCACCAGC
CTGTCCAAGC GCAGCAACGT GCCCGGCCTG CGCAGCGGCT TCGTGGCCGG CGACGCGGCG
CTGATCAAGT CCTTTTTGCT CTACCGCACC TACCACGGCA GCGCCATGGG CCCGAGCGTG
CAGGCGGCCA GCATCGCAGC CTGGGGGGAC GAGCAGCATG TGCAGGAAAA CCGCGCGCGC
TACCGCGAGA AGTTCGCCCG GGTCACCCCG CTGCTGGCCC GGGTGATGCA GGTCGCATTG
CCCGACGCCG GCTTTTACCT GTGGGCCCGG GTGCCCGACG CATTCGGCCT GGACGACACC
GGGTTCGCAC AAGCCCTGCT GGCCCAATAC AATGTCACAG TACTGCCGGG CAGTTATCTG
GCCCGGGCAG TCCAGGGCCA CAACCCCGGC GCCGGGCGCG TGCGCATGGC CTTGGTGGCC
GAAACCGAAG AATGCATGCA GGCTGCGGAG CGCATCGTGC AGTTCGCCCG ATCCCATGCG
GACCGACCCC CATCATCGAT ATCGACATGA
 
Protein sequence
MNPLLSRLQP YPFERLRQLF AGVTPAAAYS PISLGMGEPR HPAPQLVKDA LIGHLAGLGH 
YPATAGEPQL RAACAAWLQR RYGLALDPGS QLLPVNGSRE ALFAFAQTVI DPSQGPPFVV
CPNPFYQIYE GAALLAGARP YYACSDPARN FAVDWDAVPA NVWQRTQLLF LCSPGNPTGA
VMPLAEWQKL LALSERHGFV IASDECYSEI YAHDPPPLGG LQAAAASGRG DFKNLIAFTS
LSKRSNVPGL RSGFVAGDAA LIKSFLLYRT YHGSAMGPSV QAASIAAWGD EQHVQENRAR
YREKFARVTP LLARVMQVAL PDAGFYLWAR VPDAFGLDDT GFAQALLAQY NVTVLPGSYL
ARAVQGHNPG AGRVRMALVA ETEECMQAAE RIVQFARSHA DRPPSSIST