| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0247 |
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| Symbol | |
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| ID | 4691013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 269110 |
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| End bp | 271029 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639848031 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_995056 |
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| Protein GI | 121607249 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.68853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCATC TGGAACTCAC CCACCCTGAC GGCCAGCGCC AGCAGATGCA GGTGCCTGGC
ATATGCTCCA TCGGCAAGGG CACGCAGTGC GAGTTGCGGC TTGCCGGCTG GCGCATCGCC
AAGGAGCATG CGCGCTTGCT CAAAAGCCCG GCGGGCGTGC TGCTCGACGC TGGCGACAGC
TTTGCCGGCG TGCAGGTCAA TGGCCGGCGC ATCGAGACCC AGTGCGGCCC ATTGCAGGCC
AGCGACATCA TCGGCATCGG CCCCTTTCGG CTGCGCGTGC TCGACCCGCA AGCGCCGCCC
GGCGACGAAT GCGCGCCGGC GCCCGCAGTG CGCGACAGCG CCGAACCCGA TGCCCCACGG
CCCGGTGCCG GGCCAAAGAC CCACCCGCCC GGTGCCGGGC CAAAAACCCC TTGGCCCACC
CCTTGGCCCG GTGCCGCGCC AACCATCCCC CGGCCCGGCG CGCCGGCGAT GGCGCCGCCG
CAGGGCGCGG CCACTGCCGC CATGCCAGCG CCAGCCACAC CTGCGCGCGC AGCCACGGAC
GCAGCACCGC CGCCCGCCGC CGAACGACTG GCCGCGCGCG CGGACGCGCC GATGCGCGCC
CTCGAATTCG AGTGGCGCAA GCGCCTGCAC GCCAAGCTCA TCGAGGCCAT GGATCTGCGC
CGCCATGATG TCTCGCGCAT GTCCGACGAG CACCTGCGCG CCGAGGCCGA CCGTCTGATC
GTCAAGATCA TGCAGGACAT GGCGGCCGAC ATTCCGGCCG CGCTCGAGCA CGGCGCGCTG
CGCAAGCAGA TCCTCGACGA GGCCGTGGGC CTGGGGCCGC TGGAGGAGTT GCTCGCCGAC
GACTCGGTCA CCGAAGTCAT GGTCAACCGC TTCGACGAGA TCTACATCGA ACGCGCCGGA
CGGCTGCAAA AGCACGCGCT GAGCTTCACC AGCGACCAGG CCGTCATGGG AGTGATCGAG
CGCATCGTCG CGCCGCTGGG CCGGCGCATC GACGAGTCCT CGCCGATGGT CGATGCGCGG
CTCAAGGACG GATCGCGCGT GAACGCCATC ATTGCACCGC TGGCGCTCAA AGGCTCGACC
CTGACCATCC GCAAGTTCGC CAAGCGCAAA CTCGACGCCG GCGACCTGGT GCAGTTCGGC
TCGCTCAGCC CGGCCATGGC CGACTTCCTG CGCATCTGCG TGCAGGCGCG CAAGAACATC
ATCGTCTGCG GCGGCACAGG CTCGGGCAAG ACCACGCTGC TCAATATCCT GTCGAACTTC
ATCCCGCCGG GCGAGCGCGT GATCACCGTC GAGGATGCGG CCGAGCTGCG GCTCAACCAC
GAGCACTTGA TCAGCCTCGA ATCGCGCCCG GCCAACGTCG AAGGCAAAGG CGGCGTTGCC
ATCCGCGAAC TGGTGCGCAA CACCTTGCGC ATGCGGCCCG ACCGCATCGT GGTCGGCGAA
TGCCGGGGCG CCGAGGCGCT GGACATGCTC CAGGCCATGA ACACCGGCCA CGAAGGCTCG
CTGACCACGC TGCATGCCAA CAGCCCGCGC GACGGGCTGG CGCGCCTGGA AACCATGGTG
CTGATGGCCG GCATGGAACT GCCGCTGGCG GCCATCCGCG AGCAGATCGC CAGCGCGGTG
GACATCCTCG TGCAGCAAAC CCGGTTTTCT TGCGGCACGC GCATGGTCAC GCACATCACC
GAAATCAGCG GCATGGAAAG CGGCAAGATC CAGTTGCAAG ACCTGTTTGG CTTCGTCAAC
CGGGGCTACG CCATGCAAGC CGACGGCCTG AGCAAAGTGC AAGGGCACTT CAGCGGCTGC
GACACGGTGC CCCATTTCTA TGACGAACTG CGCGCCAGCG GCGCCCGGCT CGACCTGGAC
ATCTTTCGCC CCGCCCCCGA CAGCGGCAGC GGCGGCAACG CGGCTGGACA GCGGCCATGA
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| Protein sequence | MIHLELTHPD GQRQQMQVPG ICSIGKGTQC ELRLAGWRIA KEHARLLKSP AGVLLDAGDS
FAGVQVNGRR IETQCGPLQA SDIIGIGPFR LRVLDPQAPP GDECAPAPAV RDSAEPDAPR
PGAGPKTHPP GAGPKTPWPT PWPGAAPTIP RPGAPAMAPP QGAATAAMPA PATPARAATD
AAPPPAAERL AARADAPMRA LEFEWRKRLH AKLIEAMDLR RHDVSRMSDE HLRAEADRLI
VKIMQDMAAD IPAALEHGAL RKQILDEAVG LGPLEELLAD DSVTEVMVNR FDEIYIERAG
RLQKHALSFT SDQAVMGVIE RIVAPLGRRI DESSPMVDAR LKDGSRVNAI IAPLALKGST
LTIRKFAKRK LDAGDLVQFG SLSPAMADFL RICVQARKNI IVCGGTGSGK TTLLNILSNF
IPPGERVITV EDAAELRLNH EHLISLESRP ANVEGKGGVA IRELVRNTLR MRPDRIVVGE
CRGAEALDML QAMNTGHEGS LTTLHANSPR DGLARLETMV LMAGMELPLA AIREQIASAV
DILVQQTRFS CGTRMVTHIT EISGMESGKI QLQDLFGFVN RGYAMQADGL SKVQGHFSGC
DTVPHFYDEL RASGARLDLD IFRPAPDSGS GGNAAGQRP
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