Gene Veis_0203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0203 
Symbol 
ID4692793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp222193 
End bp222990 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content65% 
IMG OID639847988 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_995013 
Protein GI121607206 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.973641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.52762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGCA ACGGCCCCCT GGCGCTGGTT TTCCACACGC TGTTCGTGGT GTTCATGCTG 
GCGCCGCTGG TGATCGTCTG CATCGTCGCC TTCACGCCGC AGGGCTATCT TTCACTGCCG
ACGCAGGGCC TGAGCCTGCG CTGGTTCAAG GCGATCTTCG CTTACCCCGA ATTCCTGCGC
GCCTTCTACA CCTCGCTCTG GCTCGCGGCG CTGTCCTCGG GCATCGTGAT CGCGCTGGCC
GTGCCGGCGG CGCTGGCCAT TGCCCGCTAC CGCTTCGTTG GCCGCGAGGC GATCACGGCC
TTGTTCATGT CGCCGCTGAT GGTGCCGCAT GTCGTGCTCG GCATCGCCTT CCTGCGGTTT
TTCACGCAGA TCGGCCTGTC GGGCAGCTTC ACCGGGCTGG TGCTCAGCCA TTGTCTGATC
ATTTTTCCCT TTGCCCTGCG GCTCGTGCTC GCCGCCTCCT ACGGTATGGA CCGCCGGATC
GAGCAGGCGG CGATCTCGCT CGGCGCTGGC GCGCTGACGG TGTTCCGGCG GGTGACGCTG
CCGCTGATCC TGCCCGGCAT CGTCTCGGGC TGGCTGCTGG CTGCGATCAA CTCCTTCGAC
GAGGTCACGA TGACGGTGTT CATTGCCTCG CCGGCGACCA GCACGCTGCC GGTCAGGATG
TTTCTCTACC TTCAGGACAA TATCGATCCG CTGATCGCCG CCATTTCCGC CTGCCTGATC
GCGCTGACGG CCGCGCTGCT GTTCGTTTTC GACAGACTCT ATGGGCTCGA TCGGCTGTTC
GCGGGCGCCG CAAAGTGA
 
Protein sequence
MRSNGPLALV FHTLFVVFML APLVIVCIVA FTPQGYLSLP TQGLSLRWFK AIFAYPEFLR 
AFYTSLWLAA LSSGIVIALA VPAALAIARY RFVGREAITA LFMSPLMVPH VVLGIAFLRF
FTQIGLSGSF TGLVLSHCLI IFPFALRLVL AASYGMDRRI EQAAISLGAG ALTVFRRVTL
PLILPGIVSG WLLAAINSFD EVTMTVFIAS PATSTLPVRM FLYLQDNIDP LIAAISACLI
ALTAALLFVF DRLYGLDRLF AGAAK