| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0150 |
|---|
| Symbol | |
|---|
| ID | 4693515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 170049 |
|---|
| End bp | 170576 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639847935 |
|---|
| Product | RNP-1 like RNA-binding protein |
|---|
| Protein accession | YP_994960 |
|---|
| Protein GI | 121607153 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAACA AACTGTACGT CGGCAACTTG CCGTACTCGG TGCGCGACGG CGACCTGGAG
CAGGCCTTTG GCCAATTCGG TGCCGTCGCC AGCGCCAAGG TCATGATGGA GCGCGACACG
GGTCGATCCA AGGGCTTTGG TTTCGTCGAA ATGGGCAGCG ATGCCGAAGC CCAGGCCGCG
ATCAACGGCA TGAACGGCCA GCCTCTGGGC GGGCGCAGCA TCGTCGTCAA TGAAGCCCGC
CCGATGGAGC CTCGTCCGCC CCGCAGTGGC GGAGGTGGCT ACGGCGGCGG CGGAGGGGGT
GGCGGCGGTG GTTATGGTGG TGGCGGCGGA GGCGGTCGCA GCGGCTACGG CGGTGGCCGT
GAGGGCGGCG GCGGTGGCGG CTATGGTGGC GGTCGTGAAG GCGGCGGCTA CGGCGGGGGG
CGCAGCGAAG GCGGTTTCCG CAGCCCTTAC GGCTCTGGCA ACCGCAGTGG CGGCGGCGGT
GGTCGCGGCG GCGGTGGTTA CGGTGGCGGC AACAACAGCG GCTACTGA
|
|---|
| Protein sequence | MGNKLYVGNL PYSVRDGDLE QAFGQFGAVA SAKVMMERDT GRSKGFGFVE MGSDAEAQAA
INGMNGQPLG GRSIVVNEAR PMEPRPPRSG GGGYGGGGGG GGGGYGGGGG GGRSGYGGGR
EGGGGGGYGG GREGGGYGGG RSEGGFRSPY GSGNRSGGGG GRGGGGYGGG NNSGY
|
|---|
| |