| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0087 |
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| Symbol | |
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| ID | 4692735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 104197 |
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| End bp | 105231 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639847873 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_994898 |
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| Protein GI | 121607091 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCACA GTCCGCCCGA CGGCAAGGCC CCTGTCTGCG GGGAACTCGG GGAACCGGCC
GGCGCGGGTG ATGATCTGCT GGAGCCTGCC GATGAGGCCG ACGGCGAACT GCGCCAGATG
CAGATCGGGG CGCGCCAGCA TGCCGCCCGG ATCGATCGGG CGCTGGTGGA ACTGGTGCCG
GAGTTTTCCC GCAGCTATTT GCAGCAGTTG CTGGCGCAAG GAGGGGTCAG CCTCAACGGC
CGGCCGGTGC GCAAAGCCGC CAGCCGCGTC AACGCCGGCG ACCGGGTGGT GCTGGAAATG
CGGCCCACGG TGCAAAGCCA GGCCTTCAGG CCGCAGCCGA TGGACATCGA TGTGGTCTAC
GAGGATGCCC ACCTGCTGGT GCTGAACAAA CCGGCGGGCC TGGTGGTCCA TCCGGCGCCC
GGCCACTGGA GCGCCACCTT GCTCAACGGC CTGCTGGCGC GCGACGCCAA CGCGCTGCTG
CTGCCACGGG CCGGCATCGT CCATCGGCTG GACAAGGACA CCAGCGGCCT GATGGTCGTT
GCCCGGGACC GTGCCACGAT GGACGCATTG GTGGCGCAGA TTGCCCGGCG CCAGGTCCAG
CGCCAATACC TTGCGCTGGC GCATGGCGCC TGGAGCGGGC CTCGCAGCCG CTCCGTGCAG
GCCCCGATCG GGCGCGATCC GCGCAACCGC CTGCGGATGG CGGTGGTGGA CTTGGCGCGC
CATGCGGGCA AGTGCGCGCG CACCGATGTC CTGTGCCTGG ACGCAACGCC GCAGGGCTGC
TGGCTGCAGT GCCGCCTGCA CACCGGGCGA ACCCACCAGA TTCGGGTGCA TATGGCCTCG
TTGCAACACC CGCTGGTCGG CGATGGCCTG TACGGCGGCG CGCCGCTGGG AGCGCTGCAA
CGCCAGGCGC TGCACGCCGA GCGGCTGGCA TTCGTGCACC CGGCGACGGG CCAGGCGCTA
CAGTTTCATG CCGAGGTTCC GCAAGACATG CAGCAAGCCC TGTCGTCGTG GGGGCTGGGC
TACAATGCCC GCTGA
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| Protein sequence | MPHSPPDGKA PVCGELGEPA GAGDDLLEPA DEADGELRQM QIGARQHAAR IDRALVELVP
EFSRSYLQQL LAQGGVSLNG RPVRKAASRV NAGDRVVLEM RPTVQSQAFR PQPMDIDVVY
EDAHLLVLNK PAGLVVHPAP GHWSATLLNG LLARDANALL LPRAGIVHRL DKDTSGLMVV
ARDRATMDAL VAQIARRQVQ RQYLALAHGA WSGPRSRSVQ APIGRDPRNR LRMAVVDLAR
HAGKCARTDV LCLDATPQGC WLQCRLHTGR THQIRVHMAS LQHPLVGDGL YGGAPLGALQ
RQALHAERLA FVHPATGQAL QFHAEVPQDM QQALSSWGLG YNAR
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