| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0086 |
|---|
| Symbol | |
|---|
| ID | 4692216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 103292 |
|---|
| End bp | 103942 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639847872 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_994897 |
|---|
| Protein GI | 121607090 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
|---|
| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGG TGGATGCCAA ACGGATCCTC GAAACGGCGC TGATCTGCGC GCCGCAGCCC
GTGCCTTTGC GCGAGCTGCG GGTGCTGTTC AACGACGCGC TGGGGGCCGA CACGCTCAAA
GTGCTGCTGC AGGAGTTGCA ACTGGACTGG GCGCAGCGCG GGGTGGAGTT GGTCCAGGTA
GCGAGCGGGT GGCGTTTTCA GAGCCGCCCG CAAATGCGCG AGTACCTGGA CCGGCTGCAC
CCCGAAAAGC CGCCGCGCTA TACGCGGGCG ACGCTGGAGA CGCTGGCCAT CATGGCCTAC
CGCCAGCCGG TCACGCGCGG TGACATCGAA GACATACGCG GGGTGGCGGT CAACAGCCTG
ACCATCAAGC AATTGGAGGA CCGGGGCTGG GTGGAAGTGA TAGGGCACCG GGACAGCGTA
GGGCGCCCGG CGCTGTTTGC CACCACGCGC CAGTTTCTGG ACGACCTGGG ACTACAGTCG
CTCGACCAGT TGCCGGTGCT CGACGACCCC TCGGGCGACA CGGATGTGCT CGCCGCGATG
GCCGCCGCAG CCCGGGGCCT GATCGCACCA GAGGCGGAGC CGGCGCCTGC CGAGGATCTT
TTTCGGAACG AGCATGTGGA TGCCCCGGCA GGCATCCAGG AAAGCACTTG A
|
|---|
| Protein sequence | MNTVDAKRIL ETALICAPQP VPLRELRVLF NDALGADTLK VLLQELQLDW AQRGVELVQV
ASGWRFQSRP QMREYLDRLH PEKPPRYTRA TLETLAIMAY RQPVTRGDIE DIRGVAVNSL
TIKQLEDRGW VEVIGHRDSV GRPALFATTR QFLDDLGLQS LDQLPVLDDP SGDTDVLAAM
AAAARGLIAP EAEPAPAEDL FRNEHVDAPA GIQEST
|
|---|
| |