Gene Veis_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0068 
Symbol 
ID4690520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp84121 
End bp84948 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content71% 
IMG OID639847854 
Productmyo-inositol catabolism IolB domain-containing protein 
Protein accessionYP_994879 
Protein GI121607072 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3718] Uncharacterized enzyme involved in inositol metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00478014 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTT CCCCCCTGCT GATCAAAGCC GCGCCCGGGC GCGAGATCTG CTGCGTCACG 
CCGGCCTCCG CCGGTTGGAG CCATGTCGGC TTTCGCGCAC TGCGCCTGCA AGCCGGCGCC
AGCGAAACCC TGGAGACAGG AACGCGCGAA CTGTGCGTGG TGGTGCTCAC CGGCAGCATC
GACGCCGAAG TGGCCGGGCA ACGCCATGCC GGCCTGGGCC GGCGCGACAG CGTCTTCGAG
GAATGCGCGC CCGACGCGCT GTACCTGCCC GGCGGCCAGC GGCTGACCAT CACGGCCACG
CGCGCGGCCG AGGTCGCGCT GTGCAGCGCG CCTTGCGCCG GCGGCAACAA GCCCGTGCGC
CGCATCGACG GCACCGGCAT GCGCCGCAGC ACACGCGGCG CCGGCAGCAA CCTGCGCCAT
GTCTGCGACA TCCTGATGGG CGACAACCCG GCGGCCGAGC GCTTGCTGGT GGTCGAGGTG
ATCACCCCGG CGGGCCATTC GAGCAGTTAC CCGCCGCACA AGCACGACGA CGACGCCGCG
CCCGGCGAAA CCCGGTTGGA AGAAACCTAC TACCACCGGA TCGACCCGCC GCAGGGCTTT
GCGTTCCAGC GCGTCTACAC CGACGACCGG AGCCTGGACG AAGCCTGCGT GGTCGAGAAC
CACGATGTGG TGCTGGTGCC GCGCGGCTAC CACCCGGTGG TCACCCCCCA TGGCTACCGG
CTGTACTACC TGAACGTGAT GGCCGGCCCC CGCCGCGCCT GGGCCTTCAG AAACGACCCG
GCCCACGAAT GGCTGCTGCG CCCCGACGGC ACCGGCACCG CGGCCTGA
 
Protein sequence
MTTSPLLIKA APGREICCVT PASAGWSHVG FRALRLQAGA SETLETGTRE LCVVVLTGSI 
DAEVAGQRHA GLGRRDSVFE ECAPDALYLP GGQRLTITAT RAAEVALCSA PCAGGNKPVR
RIDGTGMRRS TRGAGSNLRH VCDILMGDNP AAERLLVVEV ITPAGHSSSY PPHKHDDDAA
PGETRLEETY YHRIDPPQGF AFQRVYTDDR SLDEACVVEN HDVVLVPRGY HPVVTPHGYR
LYYLNVMAGP RRAWAFRNDP AHEWLLRPDG TGTAA