Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0067 |
Symbol | |
ID | 4693251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 83143 |
End bp | 84099 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639847853 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_994878 |
Protein GI | 121607071 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0290166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTGGA ACGTCCGCAT CGGCATCAAC CCGCTGTCCT GGAGCAACGA CGACCTGCCG TCGCTGGGCG GTGAAACCCC GCTCGAAACC GCGCTCCGGG AGGGCGCCGA GATCGGCTAT GCCGGCTTCG AGCTGGGCTA CAAGTTTCCC GCCGACGGCC CGGCGCTCAA AGCCCGGCTC GCCGAGTTCG GCCTGGTCTG CGTCTCGGGC TGGTACAGCG GCGCGCTGGC CGAACCCGCG CCCGGCCAGA GCGACGCCCA GGCCGTGGCC GCCGAACTCG AGCGCTGCCA GCCGCATATG CGCAAGTTGC AGCACAACGA TGTCACGGTG GTGGTCTATG GCGAATGCGC CGGCACGATA CAGGGCCGGA TCGACATGCC GCTCGCCAAG CGCCCGCGCT TTGCCGGCGC CACCGCCTGG CAGCGCTACG CCGAGCGCCT GAACGCCTTT GGCGCGCAAC TGCTGGCCCG TTACGGCATC CGGCTGGCCT ACCACCACCA CATGGGCGCC TATGTCCAGG CGCCGGCCGA CATCGACCAA CTGATGGCGC TGACCGACCC CGCCAGCGTC TTTTTGCTGT TCGACACCGG CCATGCCTGG TTCGGCGGCG CCGCCGACCC GGTGGCTTTG CTCCGCAAAC ATGCGGCCCG CGTGGTGCAT GTGCACTGCA AGGACGTGCG CCCGCAAATC ATCGACCAGG CGCGCAATGG CGGCTGGAGC TTTCTCGACA GCGTCATCAA CGGCGCCTTC ACCGTGCCGG GCGACGGCGC CATCGACAAC CGGGCCATAC TGCGCGTGCT CAAGGATGTC GGCTACCAGG GCTGGCTGGT GGTCGAGGCC GAGCAGGACC CGGCCGTCGC GCCCAGCTAC GCCTATGCGC GCAAAGGCCA CGACACATTG CGCGCGCTGG TCGACCAATC GAGCGTGTGC CATGGGCCTG GCCAGCGTGA GCGCTGA
|
Protein sequence | MSWNVRIGIN PLSWSNDDLP SLGGETPLET ALREGAEIGY AGFELGYKFP ADGPALKARL AEFGLVCVSG WYSGALAEPA PGQSDAQAVA AELERCQPHM RKLQHNDVTV VVYGECAGTI QGRIDMPLAK RPRFAGATAW QRYAERLNAF GAQLLARYGI RLAYHHHMGA YVQAPADIDQ LMALTDPASV FLLFDTGHAW FGGAADPVAL LRKHAARVVH VHCKDVRPQI IDQARNGGWS FLDSVINGAF TVPGDGAIDN RAILRVLKDV GYQGWLVVEA EQDPAVAPSY AYARKGHDTL RALVDQSSVC HGPGQRER
|
| |