Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0060 |
Symbol | |
ID | 4691234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 73304 |
End bp | 74239 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639847846 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_994871 |
Protein GI | 121607064 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTTCG CTCGCCAACT GGTTCGCTGC GCATTCGCGG CGGCGCTGTC CGCAGCATGC GCCTGGGGCC AGGCCCAAAC CATCGCCGTC GTGACCCATG GCCAAGCCAA TGACGCGTTC TGGTCCGTCG TCAAGAACGG TGTCGAAGCG GCGGCCAAGG ACGCCGGCGT CAAAGTCAGC TACCGCGCGC CCGAGAGTTT CGACATGGTG GCGATGAGCC GTCTGATCGA TGCGGCAGTC AACCAAAAGC CCGACGGCCT GGTGGTTTCG CTGCCCGATG CGTCGGCCCT GGGCCCGGCC ATCGAACGCG CGGTCAAGGC CGGCATCCCG GTGATCACGA TCAATTCCGG GCTGGAATTT TCCAAGAAGC TCGGGGCCGT GCTCCATGTG GGCCAATCCG AATACGATGC CGGCAAGTCG GCCGGCGAGA AGCTCAAGTC CATGGGCGGC AAGAATGGCA TTTGTGTCAA CCAGGAAGTG GGCAATGTCG CCCTGGACCT GCGCTGCAAG GGCTTCGCCG ATGGCTTTGC CGGCAAGTCC AAGGTGCTGC CCACCGGCAA TGATCCGGCC GAAGTGCGCG CCAAGGTCAA GGCCGCCCTG GATTCGGATG CCGGCATCGA CACCATCATG GTGCTCGGCG CGGCGACCTC CGGCGACCCG AGCCTGGCCG CCGCCAAAGA CACTGGCCGC AGCGCCAAGC TGCTTATCGC GGCCTTCGAC TTGTCTGCCG GCTTCCTGAA AGCCATTGCC GCCAAGGAAG CGGCGTTCAC CATCGACCAG CAGCAGTTCC TGCAAGGCTA TCTGCCGGTG AGCTTTCTGG CGCTGCACGC AAAGTACGGC GTGATGCCGG CGGGCAATGT GCCGTCCGGC CCGAACCTGA TCACCGCCGA CAAGGCCGCG CAGGCGATCG ACCTTTCCGC CAAGGGCATT CGCTAA
|
Protein sequence | MTFARQLVRC AFAAALSAAC AWGQAQTIAV VTHGQANDAF WSVVKNGVEA AAKDAGVKVS YRAPESFDMV AMSRLIDAAV NQKPDGLVVS LPDASALGPA IERAVKAGIP VITINSGLEF SKKLGAVLHV GQSEYDAGKS AGEKLKSMGG KNGICVNQEV GNVALDLRCK GFADGFAGKS KVLPTGNDPA EVRAKVKAAL DSDAGIDTIM VLGAATSGDP SLAAAKDTGR SAKLLIAAFD LSAGFLKAIA AKEAAFTIDQ QQFLQGYLPV SFLALHAKYG VMPAGNVPSG PNLITADKAA QAIDLSAKGI R
|
| |