Gene Veis_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0047 
Symbol 
ID4695176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp60015 
End bp60758 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content65% 
IMG OID639847833 
ProductABC transporter related 
Protein accessionYP_994858 
Protein GI121607051 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGG CCGTTCTCGA AGCGCGCAAT ATCTGGAAAT CCTACGGCCC GGTGCCCATC 
CTCGAGGACG TGTCCATCGA GGCCCACGCC GGGCGTGTGC TGGTGCTGCT GGGCGACAAC
GGCGCGGGCA AATCGACGCT GATCAAGATT CTCAGCGGCG TCACCGCGCC CAGCGCAGGC
GCGCTGCTGA TGGATGGCCA GCCGGTATCC TTCCAGACGC CCAGGGATGC GCGCCAGCGT
GGCATTGCCA CGGTGTTCCA GGACCTGGCG GTCTGCAATC TGCTGTCGAT CACGCGCAAT
GTCGTTCTTG GCCGCGAGCC GATGAAGCGC TTTGGCCCGT TCCGATGGAT GGACATGAAG
AAGGCCGAGG AGCAAACCCG GCAGGCCTTT GCGGTGCTGG GCGTGAATGT GGGCAGCGAC
ATGGGCCGAC CGGCTGCCGC GCTGTCCGGC GGCCAGCGCC AGTCGCTGGC GATTGCCCGC
GCCATGCTGT TCGGCTCGAC CTGCCTGATT CTTGACGAGC CCACTTCGGC GCTGGCCGTG
CGCCAGGCGC ATGGCGTGCT CGACCAGATC AAGGCCGCTG CGGCGGCCGG GCAGGCGGTC
ATCTTCATCA CCCACAACTT CCATCACGCC CTGCTGGTGG GCGATGAGGT GGTGGTGCTC
GGCAACGGCA AGGTGATGGC CCATTTCAAC ACCGGCGAGA CCAGTCTGGA AGAACTGACC
AGGCTGGTCT CCATGCTGCA CTGA
 
Protein sequence
MKQAVLEARN IWKSYGPVPI LEDVSIEAHA GRVLVLLGDN GAGKSTLIKI LSGVTAPSAG 
ALLMDGQPVS FQTPRDARQR GIATVFQDLA VCNLLSITRN VVLGREPMKR FGPFRWMDMK
KAEEQTRQAF AVLGVNVGSD MGRPAAALSG GQRQSLAIAR AMLFGSTCLI LDEPTSALAV
RQAHGVLDQI KAAAAAGQAV IFITHNFHHA LLVGDEVVVL GNGKVMAHFN TGETSLEELT
RLVSMLH