Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0046 |
Symbol | |
ID | 4690962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 58972 |
End bp | 60018 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639847832 |
Product | inner-membrane translocator |
Protein accession | YP_994857 |
Protein GI | 121607050 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCACGT CAACGCCGCT GCCGCGCTTC CTGATGCGGC TGCGCTCGCT GCTGTTGCGG GCGGAGACGG CTGCCGCTGC GGCCTGCCTG ATGACCTTGG TCGGTTTTTC CATCGCCAGC CCGCTGTTTC TGAGCAAGGA GAGCCTGATC AGCATCACCA ATCTGGTGGC CGAGCTTGGC ATCATCAGCA TCGGCGTCAC GCTGCTGATG ATCGGCGGCC ACATCGATTT GTCGGTCGGC GCGGTGGTGG GCATCTCGTC TTACATGACG GTGTATTTTT CTTCGATCGG GCTGCCGCCT GCGCTCGCAT TCCTGGGCGC GCTGGCCATC TCCGCCGCGC TGGGCCTGGT CAACGGCTTG CTCGTCATGC GCACCGGCCT TGGCTCTTTC ATCGTGACGC TGGGCACCAT GCATGTCTTT CGCGGCCTGC TGACGGCCTG GACTGGCGGC TTTCCCGTCT CCAGCGACAT CGCCGAGCCG ATGCGCTCCA TCGTGTCGGG CGCCCTGCTG CCGGGCGGCT TTCGCATGTC GCTGGTCTGG TTTGCCATGC TGGTGCTGGG GGCGACCTTC ACGCTGCTGC GCACCCGCTT CGGCAACTGG ACTTATGCGA TTGGCCAGAA CCCGGAGGCG GCGCGCAATC TCGGCGTTCC GGTCGAGCGC ACCACGGTCG CGCTGTTCGT GCTGTGCTCG CTGTGCGGCG GCATTGCCGG GATTGTCCAG GTTGCGCGCT TCCAGTCGGT GGACGCGCTG CGCGGCGAGG GCGCGGAGTT GCTGGCCATC GCCATCACCG TGATCGGCGG CACGCTGCTG ACCGGCGGCT ATGGCAGCGC GATCGGCTCG ATGTTTGGCG CGCTCATCTT CGGCATGGTC CAGGTCGGGC TGGTGCTGGT TGGCGCGCCG GGCTATTACT TCAAGACCCT GGTCGGCGCA ACCCTGGTCG GCGCGGTGCT GGTCAACCAG AGCTTCTCCA AACTGGTCGC GTCGGGCGGC TTTTTGAAGT CGAAAGCCGC GCGCAAACCC TCCCCGCCCG CCAGGAGCCA GCGATGA
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Protein sequence | MGTSTPLPRF LMRLRSLLLR AETAAAAACL MTLVGFSIAS PLFLSKESLI SITNLVAELG IISIGVTLLM IGGHIDLSVG AVVGISSYMT VYFSSIGLPP ALAFLGALAI SAALGLVNGL LVMRTGLGSF IVTLGTMHVF RGLLTAWTGG FPVSSDIAEP MRSIVSGALL PGGFRMSLVW FAMLVLGATF TLLRTRFGNW TYAIGQNPEA ARNLGVPVER TTVALFVLCS LCGGIAGIVQ VARFQSVDAL RGEGAELLAI AITVIGGTLL TGGYGSAIGS MFGALIFGMV QVGLVLVGAP GYYFKTLVGA TLVGAVLVNQ SFSKLVASGG FLKSKAARKP SPPARSQR
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