| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0046 |
|---|
| Symbol | |
|---|
| ID | 4690962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 58972 |
|---|
| End bp | 60018 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639847832 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_994857 |
|---|
| Protein GI | 121607050 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCACGT CAACGCCGCT GCCGCGCTTC CTGATGCGGC TGCGCTCGCT GCTGTTGCGG
GCGGAGACGG CTGCCGCTGC GGCCTGCCTG ATGACCTTGG TCGGTTTTTC CATCGCCAGC
CCGCTGTTTC TGAGCAAGGA GAGCCTGATC AGCATCACCA ATCTGGTGGC CGAGCTTGGC
ATCATCAGCA TCGGCGTCAC GCTGCTGATG ATCGGCGGCC ACATCGATTT GTCGGTCGGC
GCGGTGGTGG GCATCTCGTC TTACATGACG GTGTATTTTT CTTCGATCGG GCTGCCGCCT
GCGCTCGCAT TCCTGGGCGC GCTGGCCATC TCCGCCGCGC TGGGCCTGGT CAACGGCTTG
CTCGTCATGC GCACCGGCCT TGGCTCTTTC ATCGTGACGC TGGGCACCAT GCATGTCTTT
CGCGGCCTGC TGACGGCCTG GACTGGCGGC TTTCCCGTCT CCAGCGACAT CGCCGAGCCG
ATGCGCTCCA TCGTGTCGGG CGCCCTGCTG CCGGGCGGCT TTCGCATGTC GCTGGTCTGG
TTTGCCATGC TGGTGCTGGG GGCGACCTTC ACGCTGCTGC GCACCCGCTT CGGCAACTGG
ACTTATGCGA TTGGCCAGAA CCCGGAGGCG GCGCGCAATC TCGGCGTTCC GGTCGAGCGC
ACCACGGTCG CGCTGTTCGT GCTGTGCTCG CTGTGCGGCG GCATTGCCGG GATTGTCCAG
GTTGCGCGCT TCCAGTCGGT GGACGCGCTG CGCGGCGAGG GCGCGGAGTT GCTGGCCATC
GCCATCACCG TGATCGGCGG CACGCTGCTG ACCGGCGGCT ATGGCAGCGC GATCGGCTCG
ATGTTTGGCG CGCTCATCTT CGGCATGGTC CAGGTCGGGC TGGTGCTGGT TGGCGCGCCG
GGCTATTACT TCAAGACCCT GGTCGGCGCA ACCCTGGTCG GCGCGGTGCT GGTCAACCAG
AGCTTCTCCA AACTGGTCGC GTCGGGCGGC TTTTTGAAGT CGAAAGCCGC GCGCAAACCC
TCCCCGCCCG CCAGGAGCCA GCGATGA
|
|---|
| Protein sequence | MGTSTPLPRF LMRLRSLLLR AETAAAAACL MTLVGFSIAS PLFLSKESLI SITNLVAELG
IISIGVTLLM IGGHIDLSVG AVVGISSYMT VYFSSIGLPP ALAFLGALAI SAALGLVNGL
LVMRTGLGSF IVTLGTMHVF RGLLTAWTGG FPVSSDIAEP MRSIVSGALL PGGFRMSLVW
FAMLVLGATF TLLRTRFGNW TYAIGQNPEA ARNLGVPVER TTVALFVLCS LCGGIAGIVQ
VARFQSVDAL RGEGAELLAI AITVIGGTLL TGGYGSAIGS MFGALIFGMV QVGLVLVGAP
GYYFKTLVGA TLVGAVLVNQ SFSKLVASGG FLKSKAARKP SPPARSQR
|
|---|
| |