Gene Veis_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0021 
Symbol 
ID4690849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand- 
Start bp30970 
End bp31593 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content58% 
IMG OID639847807 
Productfimbrial assembly family protein 
Protein accessionYP_994832 
Protein GI121607025 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3166] Tfp pilus assembly protein PilN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCTGA TCAACTTGCT ACCCCACCGG GAGGAAGCCC GTAAACGCCG CAAAGAGGCC 
TTTCAGGCCG CCACGCTTGC GTCGGCTCTT CTCGGCCTGG CGATCGCCGG CGCCATTTAC 
TGGGGGTTCC AGATGCTGAT CACGGATCAA CTGGACAGGA ATGCCTTCCT CCAGAAGGAA 
ACCCAGGTTC TGGAAGGACA GATCAAGGAA ATCGCCTCCA TCGAAGACGA GATATCTGCG 
CTGCGTGCCA GACAAAAGGC GGTGGAAGAT CTTCAGTCGG ACAGAAACTT GCCAGTCCAT 
TTGCTGGCCG AACTGGTCAA ACAATTGCCG GACGGAATGT TCATCACCGG CATCAGACAA 
GCGGAGCAGA CCATCACGAT GCAGGGCGTG ACTTATTCGA ATGAGCAGGT TTCCGAACTG 
CTGCGCAATC TCGCCGACAA CACCCCTTGG TTGACCAAGC CCGAGTTGGC CGAAATCGTC 
GCGGGCAGCA ATTTCGCTGC GGTCCAGAAC CAGCGCAACC CGCGCCCGGC GTCTTCATTC 
AACCTCAGGT TCCAACTGGT TCGGGCCAGC GATGCCGAAA AAACGATAGC TGCTGCCAAC 
GCTGCTGCGC CTGGAGGAAA GTGA
 
Protein sequence
MILINLLPHR EEARKRRKEA FQAATLASAL LGLAIAGAIY WGFQMLITDQ LDRNAFLQKE 
TQVLEGQIKE IASIEDEISA LRARQKAVED LQSDRNLPVH LLAELVKQLP DGMFITGIRQ 
AEQTITMQGV TYSNEQVSEL LRNLADNTPW LTKPELAEIV AGSNFAAVQN QRNPRPASSF 
NLRFQLVRAS DAEKTIAAAN AAAPGGK